| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3184 |
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| Symbol | |
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| ID | 3963054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3521847 |
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| End bp | 3523274 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918003 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_524424 |
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| Protein GI | 89901953 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCAA CCATATATGA AGCTTCTGGG TCTCGCCGGG CCTGCTCACG CACCTTGGCA
CTTGCCATAT TTCCCTTGTT CATCCTGAGC GGCTGTGCGT CCTGGTCTGC CAGGACCGCG
GATACGCCGG CTGTTGACGT GCCCACGCAT TGGTCGACGG CCGTGTCGTC CAACAACGCG
CAAGCACCTG CAACTTCACT TGCGCAGTGG TGGCAAAGAT TCAACGACCC GCTGCTCAGC
ACCCTGGTGA CGCAGGCTTT GCAGGCCAAC ACCAGCATCC TGTCGGCGCA AGCCGCGCTG
CAGCAGGCAC GAGCGCTACG CGACGTGAGA ACCGCCGGCC TGTTGCCGGG TGTGAATGCC
TCCGGGTCAG CACAACGTAG CAAGTCCGGC GATAACGATG CCAGCAACAG TTTTAGAGCC
GGGCTGGACG CCAGTTGGGA ACCCGATATT TTTGGCGGCA AACGCAGCGC CCTGAACGCC
AGCGAAGCCG ACGCCCAGGC CGCCCAGACC ACGCTGGCCG ATGTGCAGGT GTCCATCGCC
GCCGAGGTGG CACTGGCCTA CATCCAGTTG CGCGGCCAGC AGGCGCAATT GCTGATTGCC
CGCAACAACC TCGCCAGCCA GACAGAAACT CTGCAAATTA CCGATTGGCG TGCACAGGCC
GGGCTGATCA CGTCGCTGGA AGTGGAGCAA TCGCGCGCCT CTACCGAGCA AACCCGGGCC
CAAATCCCTG CGCTGGAAGC CAGCATCGCC AAGACCCGGC ACAGCCTGGC GGTGCTGACC
GGTCAGCCGC CTGACTCCCT GCAGGCACTG ATCAACGACC CGACGGCGGT GCCGCAAGCG
GCGCCGGACT TGGCCCTGAG CATTCCAGCG CAAACGCTGC GCCAGCGTCC CGATGTGCGC
ACCGCAGAAC ACCGCATCAG CGCCGCACTG GCACAGGTCT CTGCGGCCGA CGCGGCGCGC
TATCCCGGGT TTTCCATCGG CGGCTCGCTC GGGCTCAACG CCTTGACGCT TGCCGGGCTG
GGCAGCGGGG CTACGGTAGC CACCGCCTTG TTGGCCAGCG TCTCGGTGCC GCTGTTTGAC
GGTGGTGCCG CGCGCTCGCA GGTGCTGGCG CAAGAGGCCG CGCTGGAGCA GGCCCGGGTC
AACTACCAAG CCGTTGTGTT GACCGCCCTG AAAGATGTCG AAGACGCCTT GGTGGCGTTG
CAGGGCGACC GCGCCCGGCT CATCCATTTG CAAGGGGCCG CCACCGCGGC TGGCAACGCG
GACCTGATGG CGCAACAGCG CTACAGCAGC GGCCTGATTG ACTTCCAGAC CGTGTTGCAG
ACCCAGCGCA CGCTGCTCAG TGCCCAAGAC AGCGTCGCCA GCACCGAGGC CGACGTCAGC
GCCGACCATG TGCGCCTGTA CAAGGCGCTG GGGGGCGGCT GGAACTGA
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| Protein sequence | MTSTIYEASG SRRACSRTLA LAIFPLFILS GCASWSARTA DTPAVDVPTH WSTAVSSNNA
QAPATSLAQW WQRFNDPLLS TLVTQALQAN TSILSAQAAL QQARALRDVR TAGLLPGVNA
SGSAQRSKSG DNDASNSFRA GLDASWEPDI FGGKRSALNA SEADAQAAQT TLADVQVSIA
AEVALAYIQL RGQQAQLLIA RNNLASQTET LQITDWRAQA GLITSLEVEQ SRASTEQTRA
QIPALEASIA KTRHSLAVLT GQPPDSLQAL INDPTAVPQA APDLALSIPA QTLRQRPDVR
TAEHRISAAL AQVSAADAAR YPGFSIGGSL GLNALTLAGL GSGATVATAL LASVSVPLFD
GGAARSQVLA QEAALEQARV NYQAVVLTAL KDVEDALVAL QGDRARLIHL QGAATAAGNA
DLMAQQRYSS GLIDFQTVLQ TQRTLLSAQD SVASTEADVS ADHVRLYKAL GGGWN
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