Gene Rfer_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3104 
Symbol 
ID3962117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3443938 
End bp3444858 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content58% 
IMG OID637917923 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_524344 
Protein GI89901873 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAACT ATTTCCTGAA AAGGCTGCTG GGCCTAACCC CAACGCTGCT GATTGTTGCA 
GTGCTGGTGT TTTTGTTCGT GCACATGCTG CCGGGTGACC CGGCGCGTCT GGCCGCCGGC
CAGGACGCCG ACCAGCAGAC GGTGGAACTG GTTCGCCAAG AACTGGGCCT GGACCGCCCG
TTGCCTGAGC AATTTGTGAG CTACTTCGCG CATGTCGTCA AAGCCGACTT TGGTACTTCT
CTGCGCACGC GGCGACCGGT GTCCACCGAG ATTGCCGAGC GCTTCATGCC GACACTTTTG
CTGACATTGT CCAGCATGGT CTGGGCGGTG ATCTTTGGCA TGACGATTGG CATCACCTCG
GCGGTGTACC GCAACGAGTG GCCGGACCGA TTGGGCATGA CGATTGCTGT GTCGGGCATC
TCTTTTCCCG CATTTGCACT TGGCATGTTG CTGATGCAGG TGTTTTCGGT GCAACTGGGC
TGGTTCCCCA CGGTGGGGGC CGATAGCTGG CGGCATTACA TCCTGCCGTC CCTTACGTTG
GGCGCAGCGG TGGCCGCGGT GATGGCCCGT TTTACCCGGG CGTCTTTTGT TGAAGTGATT
CAGGAGGACT TCGTGCGCAC GGCGCGGGCC AAGGGGCTGA AAGAGCGCAC GGTCATTTTC
AAGCATTGCC TGCGCAATGC CTTGATACCC GTGGTCACCA TGATGGGACT TCAGTTCGGC
TTCCTGCTGG GCGGCTCCAT CGTGGTGGAA GCAGTTTTCA ACTGGCCTGG ACTGGGCCGT
TTGCTGGTCG ATGCGGTGAC CATGCGCGAC TACCCGGTCA TTCAGGCGCT GGTGCTGCTG
TTTTCCATGG AATTTATTTT GATCAACCTG ATTGTTGACG TGCTCTATGG CTTTATCAAC
CCCACCATTC GCTACAAGTG A
 
Protein sequence
MLNYFLKRLL GLTPTLLIVA VLVFLFVHML PGDPARLAAG QDADQQTVEL VRQELGLDRP 
LPEQFVSYFA HVVKADFGTS LRTRRPVSTE IAERFMPTLL LTLSSMVWAV IFGMTIGITS
AVYRNEWPDR LGMTIAVSGI SFPAFALGML LMQVFSVQLG WFPTVGADSW RHYILPSLTL
GAAVAAVMAR FTRASFVEVI QEDFVRTARA KGLKERTVIF KHCLRNALIP VVTMMGLQFG
FLLGGSIVVE AVFNWPGLGR LLVDAVTMRD YPVIQALVLL FSMEFILINL IVDVLYGFIN
PTIRYK