Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3104 |
Symbol | |
ID | 3962117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3443938 |
End bp | 3444858 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637917923 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_524344 |
Protein GI | 89901873 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAACT ATTTCCTGAA AAGGCTGCTG GGCCTAACCC CAACGCTGCT GATTGTTGCA GTGCTGGTGT TTTTGTTCGT GCACATGCTG CCGGGTGACC CGGCGCGTCT GGCCGCCGGC CAGGACGCCG ACCAGCAGAC GGTGGAACTG GTTCGCCAAG AACTGGGCCT GGACCGCCCG TTGCCTGAGC AATTTGTGAG CTACTTCGCG CATGTCGTCA AAGCCGACTT TGGTACTTCT CTGCGCACGC GGCGACCGGT GTCCACCGAG ATTGCCGAGC GCTTCATGCC GACACTTTTG CTGACATTGT CCAGCATGGT CTGGGCGGTG ATCTTTGGCA TGACGATTGG CATCACCTCG GCGGTGTACC GCAACGAGTG GCCGGACCGA TTGGGCATGA CGATTGCTGT GTCGGGCATC TCTTTTCCCG CATTTGCACT TGGCATGTTG CTGATGCAGG TGTTTTCGGT GCAACTGGGC TGGTTCCCCA CGGTGGGGGC CGATAGCTGG CGGCATTACA TCCTGCCGTC CCTTACGTTG GGCGCAGCGG TGGCCGCGGT GATGGCCCGT TTTACCCGGG CGTCTTTTGT TGAAGTGATT CAGGAGGACT TCGTGCGCAC GGCGCGGGCC AAGGGGCTGA AAGAGCGCAC GGTCATTTTC AAGCATTGCC TGCGCAATGC CTTGATACCC GTGGTCACCA TGATGGGACT TCAGTTCGGC TTCCTGCTGG GCGGCTCCAT CGTGGTGGAA GCAGTTTTCA ACTGGCCTGG ACTGGGCCGT TTGCTGGTCG ATGCGGTGAC CATGCGCGAC TACCCGGTCA TTCAGGCGCT GGTGCTGCTG TTTTCCATGG AATTTATTTT GATCAACCTG ATTGTTGACG TGCTCTATGG CTTTATCAAC CCCACCATTC GCTACAAGTG A
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Protein sequence | MLNYFLKRLL GLTPTLLIVA VLVFLFVHML PGDPARLAAG QDADQQTVEL VRQELGLDRP LPEQFVSYFA HVVKADFGTS LRTRRPVSTE IAERFMPTLL LTLSSMVWAV IFGMTIGITS AVYRNEWPDR LGMTIAVSGI SFPAFALGML LMQVFSVQLG WFPTVGADSW RHYILPSLTL GAAVAAVMAR FTRASFVEVI QEDFVRTARA KGLKERTVIF KHCLRNALIP VVTMMGLQFG FLLGGSIVVE AVFNWPGLGR LLVDAVTMRD YPVIQALVLL FSMEFILINL IVDVLYGFIN PTIRYK
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