| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3024 |
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| Symbol | |
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| ID | 3960371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3338911 |
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| End bp | 3339918 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637917844 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_524266 |
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| Protein GI | 89901795 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.167542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATTC TTCTCGCACC CATGGAGGGA CTGCTGGACT TTGTGCTGCG TGACATCCTG
ACCCGTGTCG GCGGGGTGGA CCGCTGCGTG TCCGAATTCA TCCGCGTCAG CAACACCCTG
CTGCCCGATC AGGTCTTCAT TCGCGTCGTG CCTGAATTGC TCAATGGCGG GCGCACTTTC
GCCGGCGTAC CGGTCGCCGC CCAGTTGCTG GGATCCGACC CGGTCTGCCT GGCAGAAAAC
GCCGCCCGCC TGGCCGCCCT GGGGCCACAC GGCATTGACC TGAACTTTGG CTGCCCGGCC
AAAACGGTGA ATCGCCACGG CGGCGGCGCT GCCTTGCTCG ATGAGCCCGA GCTGCTATTG
GCGATTGTGG CGGCTGTGCG CCGTGCCGTC CCCAAAACCA TGCCCGTGTC GGCCAAGATG
CGCCTGGGGG TTCATGACGA TTCACGTGCG CTGGAGTGTG CGCTGGCCCT TGAAGGTGGT
GGTGCCAGTG AGTTGGTGGT ACACGCCCGC ACCCGGGCCG ACGCTTACCG TCCACCCGCT
TATTGGGAAC GCATTGCCGA CATTCGGGCC GTGGTCAACA TTCCGGTGGT GGCCAATGGC
GAAATATGGA ATGTGCAGGA CGCGCTGCGC TGTCGCGAGG AGTCGGGCTG CGACAGCCTG
ATGCTGGGCC GCGGTATGGT GACCAACCCG GGTTTGGCCC TGGCGATTCG GGCGGCCATG
GCAGGGCCTG ATGCCAGCCC CGCGCCTTGG GGGAATGTGC GGCCCGATTC TTCCTTGACC
ACCTCCCCAG CGCTGTACCC GATCATCAAC TGGCAGGTCC TGCTGCCATT CATCGCCGAA
TTTTGGCGCC TGGTGTGCGC GCGGCTGGAT CGTCGCAAGC AGGCGGGCCG GCTCAAACAG
TGGCTCAATT TTCTGCGCCA CCACCACCCC GAAGCCGAGC GGGCCTATAT GGCGTTGCGG
ACCCTCAGTG AGCCCGCTGC CATTGGTCAG TGGCTGGCGT TGCAGTGA
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| Protein sequence | MAILLAPMEG LLDFVLRDIL TRVGGVDRCV SEFIRVSNTL LPDQVFIRVV PELLNGGRTF
AGVPVAAQLL GSDPVCLAEN AARLAALGPH GIDLNFGCPA KTVNRHGGGA ALLDEPELLL
AIVAAVRRAV PKTMPVSAKM RLGVHDDSRA LECALALEGG GASELVVHAR TRADAYRPPA
YWERIADIRA VVNIPVVANG EIWNVQDALR CREESGCDSL MLGRGMVTNP GLALAIRAAM
AGPDASPAPW GNVRPDSSLT TSPALYPIIN WQVLLPFIAE FWRLVCARLD RRKQAGRLKQ
WLNFLRHHHP EAERAYMALR TLSEPAAIGQ WLALQ
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