| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3006 |
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| Symbol | |
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| ID | 3960351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3312698 |
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| End bp | 3315091 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917826 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_524248 |
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| Protein GI | 89901777 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAG TCATCCACTT ACCCGACAGA AGCGACAGCC AGGGTGAAAA AGACACGGTG
CCCGCGCTGC CAAGCGATGC CCTGGTCATC ATTCCGGTGC GCAACATGGT GTTGTTTCCC
GGCATGGTGG TGCCGATCTC CATCGGGCGT TCAAGCTCGA TCGCCGCCGC CCAATATGCG
GTCAAGAACG ACCAGGCAGT CGGTATCCTG ATGCAGCGCA ACCCGGACGT GGAGACCCCC
GGTGCCGATG ATCTGTCAAG TGTTGGCACC ATTGCCTCCA TCCTGCGCTA CGTCACGACC
CCGGACGGCA CCCATCACAT CGTGTGCCAG GGCCAGCAAC GCTTTCGCGT GACGGGCTAC
CTTGAGGGCT TTGCCTTCAC GGTGGCGCGA ATTGAACGTA TTGCCGAAGC CGCCGCGCCG
GACAACCCGG AAATCGAGGC GCGCTTCATG CGACTCAAGG AGCGCGCCGT CGAGGTGCTG
CAAATGCTGC CCCAAGTGCC GGCAGAGATG GTGCATGCCG TGCAGGGCAT CGACACCCCG
GCGACGCTGG CCGATCTGGT GGCAGGCTAC GTGGACATCA AGGCGACCGA GAAGCAGGAA
ATTCTGGAGG AAATAGATCT GCGCCGGCGC CTGGACCGCG TGCTGGACAT GCTGGTGCAC
CGGATAGATG TCCTGAACCT CTCGCGTGAT ATTGATAAGC GTACCAAGGC CAGTCTCGGG
CAGCGTGAGC GTGAGTTCCT GCTGCGCGAG CAATTGAAGT CGATTCAAAA AGAGCTCGGT
GAAGACGCCA GCGGCAACGC CGCTGAAATC GAAGAACTGC GCAATTTGAT CGAGGAGGCC
CACATGCCCG AAGAGGTTGC CAAGCAGGCG GCCAAGGAGC TCAAACGACT GGAGCGCATG
GCCGACGGCT CAGCGGAATA CTCCATGGTG CGCACCTACC TCGACTGGCT GATTGAAGTG
CCCTGGAAAG CGCCGGAGCC GGACACGATT GACGTCGGGC AGGCGCGCCG GGTGTTAGAC
GCCGATCACT TTGATCTGGA AAAAGTGAAA AAACGCATTC TCGAATTCTT GGCGGTGCGC
AAGCTCAAGC CCAGCGGCCA CGGCCCGATC CTGTGCCTGG TGGGCCCGCC CGGCGTTGGC
AAAACCTCGC TCGGTCAATC CATTGCCCGC GCGCTGGGGC GCAAGTTTGT GCGCGTATCG
CTCGGTGGTG TACACGACGA GGCCGAGATC CGCGGCCACC GGCGCACCTA CGTCGGCGCC
CTGCCCGGCA ACATCATCCA GGCGCTGAAA AAAGCCGGCA CCCGCGGCTG CGTCATGATG
CTCGATGAAA TTGACAAGCT CGGCAGCGGC ATTCAGGGCG ACCCGTCGGC GGCGCTGCTG
GAGGTGCTTG ACCCGGAGCA AAACAACAGC TTTCGCGACA ACTACCTGGC CGTGCCTTAT
GACTTGTCAC AGGTACTTTT CATTACCACC GCCAATGTGC TCGACCCCGT TCCAGGCCCG
TTGCGCGACC GCATGGAAGT CTTGCACCTG GCGGGTTATA CGCAGGAAGA AAAGCGCGAG
ATTGCCCGGC GATACCTGGT GACGCGCCAG CTTGAGGACA GTGGCCTCAA GCCCGAACAA
CTGGCGATCA CCGACGATGC GCTCGCAGCC ATCATCCGGG ACTACACGCG CGAGGCGGGC
GTGCGCAACC TGGAGCGGCA AATTGGTGCC GTCTGCCGCC GCACCGCCGT GCGCATCGCC
GAGGGAGAGA TCCAAACTGC GCGGGTTGAC GCGCCGGATC TGGTCGAGGT GCTGGGCCCG
GCCAAATTTG AAAACGAAGT CGCCTTGCGC GCGGGCATGC CGGGGGTGGC GACCGGGCTG
GCTTGGACGC CGGTGGGCGG TGACATTCTC TTCATCGAAG CCAGTCGCAC GGCCGGCACG
GGACGCCTGA TCCTGACCGG GCAACTGGGC GACGTGATGA AGGAGTCAGC CCAGGCCGCG
CTGACGCTGG TGAAATCAAG GGCCGCCACG TTTGGGCTCG ACCCGGCCAC ACTGGAAAAA
GTCGATGTAC ACATCCATGT GCCGGCCGGT GCCATCCCGA AGGATGGCCC CAGTGCCGGT
GTCGCCATGT TCATTGCGCT AGCCTCCCTG TTCATGAACC GGCCGGTGCG CAGCGACGTG
GCGATGACCG GGGAGATCAG CCTGCGCGGC CTGGTGTTGC CGGTCGGCGG CATCAAGGAA
AAAATGCTTG CCGCCCTGGC CGCCGGCATC AAAAAAGTCA TGTTGCCAGC GCGCAATCGC
AAAGACCTGG AGGAGGTTCC GCTGCCGGCC CGGCAACAAC TCGAGTTCGT CTACCTTGAC
GACATCGACG AGGCGGTGCT TGCCGCCATT GACGTCGCGC GTGACGCCCC TTGA
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| Protein sequence | MNQVIHLPDR SDSQGEKDTV PALPSDALVI IPVRNMVLFP GMVVPISIGR SSSIAAAQYA
VKNDQAVGIL MQRNPDVETP GADDLSSVGT IASILRYVTT PDGTHHIVCQ GQQRFRVTGY
LEGFAFTVAR IERIAEAAAP DNPEIEARFM RLKERAVEVL QMLPQVPAEM VHAVQGIDTP
ATLADLVAGY VDIKATEKQE ILEEIDLRRR LDRVLDMLVH RIDVLNLSRD IDKRTKASLG
QREREFLLRE QLKSIQKELG EDASGNAAEI EELRNLIEEA HMPEEVAKQA AKELKRLERM
ADGSAEYSMV RTYLDWLIEV PWKAPEPDTI DVGQARRVLD ADHFDLEKVK KRILEFLAVR
KLKPSGHGPI LCLVGPPGVG KTSLGQSIAR ALGRKFVRVS LGGVHDEAEI RGHRRTYVGA
LPGNIIQALK KAGTRGCVMM LDEIDKLGSG IQGDPSAALL EVLDPEQNNS FRDNYLAVPY
DLSQVLFITT ANVLDPVPGP LRDRMEVLHL AGYTQEEKRE IARRYLVTRQ LEDSGLKPEQ
LAITDDALAA IIRDYTREAG VRNLERQIGA VCRRTAVRIA EGEIQTARVD APDLVEVLGP
AKFENEVALR AGMPGVATGL AWTPVGGDIL FIEASRTAGT GRLILTGQLG DVMKESAQAA
LTLVKSRAAT FGLDPATLEK VDVHIHVPAG AIPKDGPSAG VAMFIALASL FMNRPVRSDV
AMTGEISLRG LVLPVGGIKE KMLAALAAGI KKVMLPARNR KDLEEVPLPA RQQLEFVYLD
DIDEAVLAAI DVARDAP
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