Gene Rfer_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2982 
Symbol 
ID3960613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3288890 
End bp3290452 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content63% 
IMG OID637917802 
Productnitrogen metabolism transcriptional regulator, NtrC, Fis family 
Protein accessionYP_524224 
Protein GI89901753 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR01818] nitrogen regulation protein NR(I) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.980884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCGA TTTGGATCGT AGATGATGAC CAGTCCATCC GCTTCGTGCT GGAGAAGGCG 
CTGCTGCGAG AAGATTTGCC CACGCGCAGT TTCACCAGTT CGCGCGAGGT GCTGGCCGCG
CTCAATGACT GCAACGACGA CAACGCGCCA CGCGTGTTGG TGAGTGACAT TCGCATGCCG
GGCGGCTCGG GTTTGGATCT ACTGGAAAAA GTGAAGGAAA AATACCCTGC GCTGCCGGTG
ATCATCATGA CCGCGTATTC CGATCTGGAC AGCGCGGTAT CGGCCTTTCA GGGCGGCGCG
TTTGAATACC TGCCCAAGCC ATTTGACCTG TCCAAGGCGG TGGAGCTGAT TCGCCGCGCG
GTAGAAGAAA GCCAGCGCGA AGAAGTGGCG CAAGAACTCA CCTCCGACGC CCCCGAGATG
CTGGGACAGG CGCCGGCCAT GCAGGATGTG TTTCGCGCCA TCGGCCGTTT GAGCCAGAGC
AACGTCACGG TCATGATCAC CGGTGAGTCT GGCTCGGGCA AAGAGCTGGT GGCGCGTGCG
CTGCACAAGC ACTCGCCACG CGCCAAGGGG CCGTTTGTGG CGATCAACAC CGCGGCCATC
CCCAAAGATT TGCTGGAATC CGAACTGTTC GGGCACGAGC GCGGCGCCTT CACCGGCGCG
CAAGCCATGC GCCGGGGCCG CTTTGAGCAG GCCGATGGCG GCACGCTGTT TCTGGATGAA
ATCGGCGACA TGCCGTTTGA CCTGCAAACC CGTTTGTTGC GCGTCTTGAG CGACGGCCAT
TTTTACCGCG TGGGGGGCCA CAGCGCCGTC AAGACCAATG TGCGCGTGAT TGCCGCCACG
CACCAAAACC TGGAGCAACG CGTCAAGGAG GGCGCCTTCC GGGAGGATCT GTTTCACCGG
CTCAACGTCA TCCGCCTGCG CCTGCCGCCC TTGCGTGAGC GCAAGGAGGA CATTGCCGTA
CTGACGCGCC ACTTTTTGCA GCAAAGTGCC GCCCAGCTGG GTGTCGAGCC CAAGAGGATT
TCAGAAGCGG CCCTGGTGTG GCTCGGCAAC TTTGCCTTTC CGGGTAACGT GCGGCAGCTG
GAAAACATCT GCCACTGGTT GACCGTGATG GCGCCAGCAC AGGTGATCGA ACCCAAGGAC
TTGCCGCCGG AAGTGGGGGT GATGGCAACT GGCCCCGGTG AGACGCCGGC CGCCATGCCC
TCGCCCGCAA CCCTGATGAT GTCTGCCCCG CAACCGCACC CACCCGAGTC ATCGGTGGTA
GCCGCCACCG CAGGCCCAGA GTCAATGCCC TCTTACGGAT CGGCTGCCAC GGCGCCACCG
CAGCCTGGCA GCGCCGGTGA AGTGGTCGGG GCGGCCTGGG AGTTGGGGCT TGAAGCCGAG
GCCCTTGCCT TGCTGGCAAG TGGTCGCAAT GATGTGTGGG ACGCCCTGAC GCACCGTTTT
GAGGCGCGAT TGATTCTGGC CGCACTGGCC GTCACCCGGG GCCGACGCAT TGAGGCAGCC
CAAAAGCTGG GCATCGGGCG CAACACCATC ACGCGCAAGA TTCAGGAGTT GGGTTTGGAG
TAA
 
Protein sequence
MKPIWIVDDD QSIRFVLEKA LLREDLPTRS FTSSREVLAA LNDCNDDNAP RVLVSDIRMP 
GGSGLDLLEK VKEKYPALPV IIMTAYSDLD SAVSAFQGGA FEYLPKPFDL SKAVELIRRA
VEESQREEVA QELTSDAPEM LGQAPAMQDV FRAIGRLSQS NVTVMITGES GSGKELVARA
LHKHSPRAKG PFVAINTAAI PKDLLESELF GHERGAFTGA QAMRRGRFEQ ADGGTLFLDE
IGDMPFDLQT RLLRVLSDGH FYRVGGHSAV KTNVRVIAAT HQNLEQRVKE GAFREDLFHR
LNVIRLRLPP LRERKEDIAV LTRHFLQQSA AQLGVEPKRI SEAALVWLGN FAFPGNVRQL
ENICHWLTVM APAQVIEPKD LPPEVGVMAT GPGETPAAMP SPATLMMSAP QPHPPESSVV
AATAGPESMP SYGSAATAPP QPGSAGEVVG AAWELGLEAE ALALLASGRN DVWDALTHRF
EARLILAALA VTRGRRIEAA QKLGIGRNTI TRKIQELGLE