| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2958 |
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| Symbol | |
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| ID | 3962239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3265844 |
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| End bp | 3266635 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917777 |
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| Product | Sec-independent protein translocase TatC |
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| Protein accession | YP_524200 |
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| Protein GI | 89901729 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.666331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGATC CCGTCAACAA CACAGATGAA CTCGCCGGCA CTGAACAACC GTTTGTCGCC
CATCTGATTG AGTTGCGCGA CCGGCTGTTG CGCTCGGTGT ATGGCATTGC CGCGGTATTG
GCGGTGCTGC TTTTCTACCC TGGCCCCTCC CATCTTTACG ACTTGCTGGC GATGCCGCTG
GTCAAGGCGC TGCCTGAAGG CTCGCGCATG ATCGCGGTGG GCGTGGTCTC GCCGTTTTTG
GTGCCGATCA AGGTGTCGGT GCTGGCGGCC ATTGGTTTGT CCCTGCCCTG GATTCTTTAT
CAGATCTGGG CCTTTGTGGC CCCGGGCCTT TACAAGCACG AGAAGAAGCT TGTGCTGCCG
CTGGTGGCGG CAAGCACCGT TCTTTTTTAC ATGGGTGCGG CGTTCTGCTA TTTCTTTGTC
TTCGGGCAAG CCTTTCCAGC GATCCAGCGC ATGGCACCGA TCTCGGTGGC GGTCAGTCCT
GACATTGAGG CTTATCTTGA CTTCGTCATC ACCATGTTCA TCGCGTTTGG TGTCGCTTTT
GAAGTGCCCA TCGTCGTTGT GATTCTGGCC CGGATGGGGA TCGTGACGGT GGCGCAGTTG
AAGTCATTTC GTACTTACTT TGTCGTCGGT GCGGCAGCGG TGGCCGGTCT CGTCACACCG
CCCGATCCAG TCTCCATGGT TGCCTTGCTG CTTCCGATGG TCCTGCTGTA TGAAGTCGGC
ATTTTCTCGG CCAAAGTCTT CATCAAGCAC ACGGCAGCAC CAGACGACGC GGCCGATGCC
GCAAACGTCT GA
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| Protein sequence | MTDPVNNTDE LAGTEQPFVA HLIELRDRLL RSVYGIAAVL AVLLFYPGPS HLYDLLAMPL
VKALPEGSRM IAVGVVSPFL VPIKVSVLAA IGLSLPWILY QIWAFVAPGL YKHEKKLVLP
LVAASTVLFY MGAAFCYFFV FGQAFPAIQR MAPISVAVSP DIEAYLDFVI TMFIAFGVAF
EVPIVVVILA RMGIVTVAQL KSFRTYFVVG AAAVAGLVTP PDPVSMVALL LPMVLLYEVG
IFSAKVFIKH TAAPDDAADA ANV
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