| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2934 |
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| Symbol | gltD |
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| ID | 3960869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3248359 |
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| End bp | 3249825 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917753 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_524176 |
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| Protein GI | 89901705 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAAG TAACGGGTTT CATGGAGTTT GAACGCATCG AGGAGGGCTA CAAGCCAGTG
CCTGAGCGCT TGAAGAATTA CAAAGAGTTT GTGCTCGGCC TGGATGACAA GCAGGCCAAC
AAGCAGGCGG CGCGCTGCAT GGACTGCGGC ACGCCGTTTT GCAGCAGCGG CTGCCCGGTC
AACAACATCA TTCCGGATTT CAACGACCTG GTGTACCGGG GCGACTGGAA AAATGCGATT
GAAGTGCTGC ACAGCACCAA CAACTTCCCC GAGTTCACCG GCCGCATCTG CCCGGCGCCG
TGCGAGGCGG CTTGTGTGCT CAACGTGAAC GACAGTGCCG TGGGCATCAA GTCGATTGAA
CACGCCATCA TCGACCGCGC CTGGTCTGAG GGCTGGGTCA CCGCGCGCCC GGCCCAACAC
AAAACCGGAA AAACAGTGGC GGTGGTGGGC TCCGGCCCGG CCGGCATGGC GGCAGCGCAG
CAGCTGGCGC GGGTCGGCCA CGACGTCACC CTGTTCGAGA AAAACGACCG CGTCGGCGGC
TTGCTGCGTT ATGGCATTCC TGATTTCAAG ATGGAAAAGT CGCACATCGA CCGCCGTGTG
GAACAGCTGC AACAAGAGGG CGTGACGATT CGCACCGGAG TCCTGGTCGG CGCCATGCCC
AAGGGCTCCA AGGTCACCAA CTGGGCCAAA GAAACAATTT CTCCCGCTCA GTTGCAACAA
GACTTTGACG CCGTGTTGCT GACCGGCGGC GCCGAGCAGT CGCGTGACCT GCCCGTGCCG
GGGCGCGATC TGGATGGCAT TTATTTCGCC ATGGAGTTTT TGCCCCAGCA AAACAAGGTC
AACGCCGGTG ACAAGCTGAA GGGCCAGTTG CGTGCCACGG ACAAACACGT CATCGTGATT
GGCGGCGGCG ACACCGGCTC TGACTGCGTC GGCACCAGCA ACCGCCATGG CGCGGCCAGC
GTCACCCAAT TTGAGGTGAT GCCGCAACCC CCGGCGGAGG AAAACCGGCC GCTGACCTGG
CCCAATTGGC CCATGAAACT GCGCACCAGT TCCAGCCACG AGGAGGGTTG CACCCGTGAG
TTCGCCGTTT CCACCAAGGA ATTCATCGGT GAAAAAGGCA AACTCACAGG CATCAAGACC
GTCCATGTTG CGTTCAAGGA CGGCCAGATG GTAGAGATTG CCGGTACCGA GAAAACCTAC
CAGGCCGATT TGGTGTTGCT GGCCATGGGT TTTGTCCATC CGGTCGCCAC GGTGCTGGAG
GCTTTTGGCG TCGCCAAGGA CGCACGCGGC AACGCCAAGG CGACCACCGA GTTCAGCGGC
GGCTACGCCA CCAATGTGGC CAAGGTGTTT GCGGCGGGCG ACATGCGCCG CGGCCAGAGT
CTGGTGGTGT GGGCGATTCG CGAAGGTCGC CAGGCAGCGC GAGCGGTGGA CGAATTCCTG
ATGGGATTCA GCAATCTGCC ACGCTGA
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| Protein sequence | MGKVTGFMEF ERIEEGYKPV PERLKNYKEF VLGLDDKQAN KQAARCMDCG TPFCSSGCPV
NNIIPDFNDL VYRGDWKNAI EVLHSTNNFP EFTGRICPAP CEAACVLNVN DSAVGIKSIE
HAIIDRAWSE GWVTARPAQH KTGKTVAVVG SGPAGMAAAQ QLARVGHDVT LFEKNDRVGG
LLRYGIPDFK MEKSHIDRRV EQLQQEGVTI RTGVLVGAMP KGSKVTNWAK ETISPAQLQQ
DFDAVLLTGG AEQSRDLPVP GRDLDGIYFA MEFLPQQNKV NAGDKLKGQL RATDKHVIVI
GGGDTGSDCV GTSNRHGAAS VTQFEVMPQP PAEENRPLTW PNWPMKLRTS SSHEEGCTRE
FAVSTKEFIG EKGKLTGIKT VHVAFKDGQM VEIAGTEKTY QADLVLLAMG FVHPVATVLE
AFGVAKDARG NAKATTEFSG GYATNVAKVF AAGDMRRGQS LVVWAIREGR QAARAVDEFL
MGFSNLPR
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