| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2904 |
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| Symbol | |
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| ID | 3963384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3214374 |
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| End bp | 3215216 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917723 |
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| Product | prepilin peptidase |
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| Protein accession | YP_524146 |
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| Protein GI | 89901675 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGTGG CAACATGGTT TGACGCCACC GTGCTGGGCG TTCTGGGCTT GTTGATTGGC
AGCTTTCTCA ACGTGGTGAT TTACCGGTTA CCGGTCATGC TGGAAGCGCA GTGGAAAGCC
GAGTGCGCCG AAATGACCGG TAAAGAAACG ACGTCGGCAG AGAAGTTCAA TCTGGCCGTA
CCTCGCTCGC GCTGCCTGAA GTGCGACCAT CAAATCCAGT GGTATGAAAA CATTCCGGTG
TTCAGCTATC TCTTTTTACG GGGAAAATGT TCAAACTGCA AGGCTCCCAT CAGCTTGCGT
TACCCCTTGG TGGAGCTGGC AACGGCTGCC CTGTTTGTTT ATTGCGGCTG GAAATGGGGC
GCCACACCCA CTGCTCTGGT CTGGTGCGGT TTCGGTGCCA CCATGCTGGC GTTGGGCTGC
ATCGACTGGG ACACCACGCT GTTGCCGGAT GACATCACCC TGCCGCTGCT CTGGGCGGGC
TTGATTGCCG CCGCGCTGCA ATGGACACCC GTCGCGCTGC CAGAGGCGCT TTGGGGCGCT
GTGGCGGGCT ATGTGTCACT GTGGCTGGTT TATTGGGCCT TCAAGCTCGT GACCGGCAAG
GAAGGCATGG GTTTTGGCGA CTTCAAGCTG TTTGCTGCAC TGGGTGCCTG GTTCGGCTGG
CAGGCGCTGG TGCCCATCAT TTTGATGGCT TCGGTGATTG GCGCGGTGAT TGGCATTGCC
ATGAAATTCT CCAGCGGGTT GCGTGAAGGT GGCTACATTC CTTTCGGGCC TTTTCTGGTC
GGCGCCGGCC TGACTGCGAT GATTTTTGGC CCCGGCTCGA TTCTTCGCGC GTTTGGGCTC
TAG
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| Protein sequence | MLVATWFDAT VLGVLGLLIG SFLNVVIYRL PVMLEAQWKA ECAEMTGKET TSAEKFNLAV
PRSRCLKCDH QIQWYENIPV FSYLFLRGKC SNCKAPISLR YPLVELATAA LFVYCGWKWG
ATPTALVWCG FGATMLALGC IDWDTTLLPD DITLPLLWAG LIAAALQWTP VALPEALWGA
VAGYVSLWLV YWAFKLVTGK EGMGFGDFKL FAALGAWFGW QALVPIILMA SVIGAVIGIA
MKFSSGLREG GYIPFGPFLV GAGLTAMIFG PGSILRAFGL
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