| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2873 |
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| Symbol | |
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| ID | 3962398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3173806 |
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| End bp | 3174885 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917692 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_524115 |
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| Protein GI | 89901644 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGTC GTTCTTTAAT TAAACACGCC GGCATTGCCG GTGTACTGGC CGCCGGTGTG
GCGCCGGCTG TGCACGCGCA GGCCGCCATT CGATGGCGTC TGGCTTCGAG CTTTCCAAAA
TCACTGGACA CTATTTTTGG TGCGGCCGAA GTGTTTTCCA AGGCTGTCAA GGAAATGTCT
GGAGGCAAGT TCGAAGTGTC GGTGCATGCG GCCGGGGAGC TGATGCCGGC GTTTGGCGTG
GTCGATGGCG TGCAAAACGG TACGGTGGAA ATGGCGCACA CTGCGCCGTA CTACTTCTTC
GGCAAGAACG AGGCCTTCGC CATCGGCGGC GCTATTCCCT TCGGCATGAA CTCGCGCCAA
CTCACGGCAT GGATTGTGGA CGGCAACGGC GGCAAGCTGA TGCGCGAGTT TTATGCCAAG
TACAGCATTG TCAACTTCCT GGGCGGCAAC ACGGGCGCGC AAATGGGGGG CTGGTTCCGC
AAGGAGATCA AGTCGCCTGC GGACATCAAG GGTCTGAAAT TTCGTATTGG CGGCTTTGCC
GGCAAGGTGA TCGAGCGCAT GGGCGGTGTG CCGCAGAACA TTCCTGGCGG CGAGATCTAT
CAGGCGCTGG AAAAGGGCAC CATCGATGCG GCCGAATGGA TCGGCCCGTA CGATGACCAG
AAGCTGGGCT TCAACAAGGT GGCGCCGTTT TATTACTACC CCGGCTGGTG GGAGGGTAGC
CTGAACCTTG AGTTCTATGT GAATCAAAAA GCCCTCAATG GCCTGTCGGC CGAAAACAAG
GCCATTGTGC AGGCCGCGGC CTACGAGGCC CATGTCACTA CGCAGGCCCG CTACGATGCG
CGCAACCCCG GTGCGCTCAA GCAGCTCGTC GCCGCCAAAA CCAAGGTGCT GCCGTTTCCT
CAGTCCGTGC TGGATGCATC GTTCCAGGCG TCCATGGATC TGTACGGAGA TCTGGAAAAG
AGCAACCCGG ACTGGAAGAA AATTTACGAC GATTACCGCA ACTTCCAGCG CGACGAGATT
CTCTGGTTCC GTTTTGCCGA GGGGCGCTTC GACAGCTTCA TGTCCTCCAA GAAGCTCTGA
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| Protein sequence | MDRRSLIKHA GIAGVLAAGV APAVHAQAAI RWRLASSFPK SLDTIFGAAE VFSKAVKEMS
GGKFEVSVHA AGELMPAFGV VDGVQNGTVE MAHTAPYYFF GKNEAFAIGG AIPFGMNSRQ
LTAWIVDGNG GKLMREFYAK YSIVNFLGGN TGAQMGGWFR KEIKSPADIK GLKFRIGGFA
GKVIERMGGV PQNIPGGEIY QALEKGTIDA AEWIGPYDDQ KLGFNKVAPF YYYPGWWEGS
LNLEFYVNQK ALNGLSAENK AIVQAAAYEA HVTTQARYDA RNPGALKQLV AAKTKVLPFP
QSVLDASFQA SMDLYGDLEK SNPDWKKIYD DYRNFQRDEI LWFRFAEGRF DSFMSSKKL
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