| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2861 |
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| Symbol | |
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| ID | 3962386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3160047 |
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| End bp | 3160727 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917680 |
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| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
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| Protein accession | YP_524103 |
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| Protein GI | 89901632 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.518579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAA CCCGAAAAAT CGCTGTTTTA CTCGCCGGCT GCGGCCACCT TGATGGCGCT
GAGGTACGCG AGGCGGTGCT CACCCTGCTG GCGCTGGATC AGCATGGCGC GGCGTTTCAG
TGCATCGCGC CCAACGCGCC GCAATTCCAT GTGATCAACC ACATCACCGG TGAGCCGGTG
GCAGGTGCGC AGCGTAACAT TCTGGAAGAG TCCAGCCGCA TCGCCCGCCT GGGTCAGTGT
CTGGATCTGG CCAAGGCCAA GGTGGCGGAC TACGACGCGC TGGTGATGCC GGGTGGCTAC
GGTGTGGCCA AAAATAATTG CTCGTTTGCC TTCAAGGGCG CAGATGCCGA GGTGCGCCCT
GACGTGGCGG CGTTTGTGCG TGGCTTTTTT GACGCCAAGA AGCCGGTGGG TGCCATCTGT
ATTGCCCCTG CACTGGTGGC GCTGGCCTTG CATCAGGTGG ATGACAGCGC AACATTGACT
TTGGGGAACG ATGCGGGTGT CGCCGCCGCC ATGGGTCAGC TCGGCCAACG GCATCAGAAC
ACGCCCAACG CACGCGAGAT CGTGATTGAT GAGGCGCATA AACTCGTGAC CACCCCGGCC
TACATGTTTG ACGATGCGCG CCTGAGCGAC GTGTTTGTCG GCATTGAGCG CTGCGTGGCC
GAGGTGCTCA AGCGCATTTG A
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| Protein sequence | MAKTRKIAVL LAGCGHLDGA EVREAVLTLL ALDQHGAAFQ CIAPNAPQFH VINHITGEPV
AGAQRNILEE SSRIARLGQC LDLAKAKVAD YDALVMPGGY GVAKNNCSFA FKGADAEVRP
DVAAFVRGFF DAKKPVGAIC IAPALVALAL HQVDDSATLT LGNDAGVAAA MGQLGQRHQN
TPNAREIVID EAHKLVTTPA YMFDDARLSD VFVGIERCVA EVLKRI
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