Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2815 |
Symbol | |
ID | 3964266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3115573 |
End bp | 3117537 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637917634 |
Product | carbamoyl-phosphate synthase L chain, ATP-binding |
Protein accession | YP_524058 |
Protein GI | 89901587 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.102576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTCT CAAAGATTCT GATTGCCAAT CGCGGCGAGA TCGCTTGTCG CGTGATTCGA ACCGCGCGTA ACTTGGGTTA TCGAACCGTT GCTGTCTACA GTGATGCTGA CCAGGCGGCG CCGCACGTCC GTCTGGCCGA TGAAGCGGTC CACATCGGGG GCTCTGCGGC AGCCGATTCC TACCTGCGGG TGGAGGTTTT GCTGCAAGCC GCGCGCAAGA CCGGTGCCGA TGCCATTCAT CCCGGTTACG GATTCCTGAG CGAAAACGCG GGCTTTGCCC AGGCCTGCCT GGATGCTGGA CTCGTTTTCA TTGGGCCGCC TCCGAGTGCC ATTGAGGCGA TGGGTGACAA GGCGCTGGCC AAGCGTCGCA TGATCGCCGC CGGTGTGCCC TGCGCGCCAG GTTATCTGGG TGAAGAGCAG GACGACGCGC GACTGACTGA GGAAGCGTTG AAACTCGGTT TCCCGCTGCT GGTCAAGGCG GTGGCGGGTG GTGGTGGTCG TGGTATGCGC CTGGTGCGTG AGGCTGGCGA AATTAAACAG GCCATTGTGG CTGCCCGGCG TGAGGCGCAA AGTGCCTTTG GCGATGGCAC CTTGATGCTG GAACGCTTGA TCGACAACGG TCGGCATATT GAAATCCAGG TGTTTGCCGA CGCGCACGGC CATGCCGTGT ACCTGGGCGA GCGCGACTGC ACAGCCCAGC GCAGAAGGCA GAAAGTGATC GAGGAAGCGC CGTCGCCCGT CGTTAATGCG GCGCTGCGCG AGTCCATGGG CAAGGATGCT GTTGCGGCAG CACTGGCCGT GGGTTACCGC GGGGCGGGCA CGGTGGAGTT CATCGTTGAT GCCGACCTCA AGCACTATTT CCTGGAAATG AACACCCGTT TGCAGGTCGA GCACCCGGTG ACCGAGCTGG TGACGGGGTT TGATCTGGTG GAGTGGCAAC TGCTGGTGGC AGCCGGTCAG CCCCTGCCGG CAATTCAGGC CGACATCAAA CTGACGGGCC ATGCGATGGA AGCGCGCCTG TATGTGGAAG ACCCGTATGC CGGCTTTGCG CCACAAACCG GAACGGTGCG CTGGTGGCGT CCCCAGCAAG CCCTGTTGGC CGGGGTGCGC ATTGACGACG GCATCGAAGA GGGCAGTGAA ATTTCTCCCT ATTACGACGC CATGGTGGCC AAGGTCATCG TGCATGGGCG TGACCGCAAT GAGGCGATCC GCCGCTTGCG CGCCGCCCTG GAGAACGCGC CCCTGCTCGG GCTGCGCAAC AACGGTCGTT TTCTGTCTGA TCTGGTGAAC CATCCGGCAT TCCGTGCCGC GGCGATGACC ACCACCCTGA TCGACCAGTG GCAGGAGGCG GGTGAGGCGC TGCTGCAGCG TCCGCTGCCG GGCGACGAAG CCTGGTGCGT TGTGGCAGCA AGCTTGGCCA TGCAAAACGG CGCCAACTGG CGTGCCGACA GTGTGGCGGC CTTTGATATG CCTTTGCGCT GCGATGAGCT CACGCAAACG CTTCGGGTTC ACCCGGACCG GTCGGGGCAG GTGGCGGTCA CTTTGGGAGG CCAAAAGCAT CTGGTGCGGA TCATCGACTT CAAGGATGGC AAGCTGCGCT TCGAGATCGA TGGCGTGACG CGAACCGCGG TGGCGGTCAA GCATCAGCAG GAATTGCACA TCGCGTTGGG AGGCGCCTCT TTTGTCTTCC ATGAAGTTTC GCCATTTCCA GGCAAAGACG CGGCGCTGGA CGCCACCCGG GCGCTATCCC CTGTGGCCGG CAAGGTCACG CAAATTCAAT TTGCGGTCGG TGAGGGCGTC AAAGAGGGGC AGGCCCTGGT CTGCGTTGAA GCCATGAAGA TGGAAATGTG GCTGACGGCA CAGGCCGCCG GCACGGTGGT GGCCTTGCAC GTGAAAGTTG GCGAGCAGGT CGAATCGGGT GCCTTGCTGA TCGAAATTGA ACTGGAAGAC GAAAAGGAAA CATGA
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Protein sequence | MSFSKILIAN RGEIACRVIR TARNLGYRTV AVYSDADQAA PHVRLADEAV HIGGSAAADS YLRVEVLLQA ARKTGADAIH PGYGFLSENA GFAQACLDAG LVFIGPPPSA IEAMGDKALA KRRMIAAGVP CAPGYLGEEQ DDARLTEEAL KLGFPLLVKA VAGGGGRGMR LVREAGEIKQ AIVAARREAQ SAFGDGTLML ERLIDNGRHI EIQVFADAHG HAVYLGERDC TAQRRRQKVI EEAPSPVVNA ALRESMGKDA VAAALAVGYR GAGTVEFIVD ADLKHYFLEM NTRLQVEHPV TELVTGFDLV EWQLLVAAGQ PLPAIQADIK LTGHAMEARL YVEDPYAGFA PQTGTVRWWR PQQALLAGVR IDDGIEEGSE ISPYYDAMVA KVIVHGRDRN EAIRRLRAAL ENAPLLGLRN NGRFLSDLVN HPAFRAAAMT TTLIDQWQEA GEALLQRPLP GDEAWCVVAA SLAMQNGANW RADSVAAFDM PLRCDELTQT LRVHPDRSGQ VAVTLGGQKH LVRIIDFKDG KLRFEIDGVT RTAVAVKHQQ ELHIALGGAS FVFHEVSPFP GKDAALDATR ALSPVAGKVT QIQFAVGEGV KEGQALVCVE AMKMEMWLTA QAAGTVVALH VKVGEQVESG ALLIEIELED EKET
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