Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2758 |
Symbol | |
ID | 3963122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3045909 |
End bp | 3046952 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637917576 |
Product | extracellular solute-binding protein |
Protein accession | YP_524001 |
Protein GI | 89901530 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.181201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAA AACACATCCC TGCAGCATGC GCCATCTTGT TCGCCTGCAC TGCTGTATCG GCGCAAGACC AGGTCCTCAA CATCTACTCC GCCCGTCACT ACCCATCGGA CGAGGCGCTT TACAGCACCT TCACCAAGAC CACGGGCATC AAGATCAATC GGGTTGACGC CGACGATGCG GGCATTCTCG CGCGCCTGAA GGCAGAAGGA ACCGCATCGC CTGCCGACGT CATTTTGTTG GTCGATGCCG CGCGGTTATG GAAAGGTGAA GTTGAAGGGC TCTTCCAACC CATCAAGTCC AAAATATTGA CTGAGGCCAT TCCCGCTCAA CTGCACGGAA AAACTACTGC GGACGGCGCT TCCCAGTGGT TCGGTTTTTC AACCCGCGCC CGTGTCATCG TGTACAACAA GGACAACGTT CAGAAACAGG ATGTCGATAC CTACGAAGAA CTGGGCGACC CCAAAAACAA GGGAAAATTG TGCATCCGCT CCGGCTCTCA CCCGTACAAC CTGTCGTTAT TTGGCGCCGT GCTTGAGCAC TTGGGCGAAG AGAAAACACA GGCTTGGCTC AAAGGCATGG TCGACAACAT GGCGCGCACG CCCAAAGGCG GTGACACGGA CCAGATCAAA GGCGTGGCCT CGGGCGAATG TGGCATTGCG GTGACCAACT CCTACTACCT GGCTCGCATC ATGCGCTCGG ACAAGCCTGA GGACAAAGCC ATCATTGAAC GGGTCGGTGT TGTGTTCCCA AACCAGGCGT CGTGGGGAAC CCACGTCAAC ATCGCGGGTG GCGCGGTGGC CAAACATGCC AAGAACCAGG CCAACGCTGT CAAATTTTTG GAGTATCTGG CCAGCGCCCC AGCGCAGGAC CAGTTTGCCA ACGGCAATAA CGAATGGCCG GTGGCCAAAG GCGTCAAGAT CAGCAACCCA GCCCTGCAGA CCATGACCGG TGGCAGCTTC AAGAGCGAAA CCATCCCCAT CAGTGTGGTG GGGATGAACC AGGTCAAGGT TCAGCAAATG CTTGACCGGG TTGGTTTCAG ATGA
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Protein sequence | MIKKHIPAAC AILFACTAVS AQDQVLNIYS ARHYPSDEAL YSTFTKTTGI KINRVDADDA GILARLKAEG TASPADVILL VDAARLWKGE VEGLFQPIKS KILTEAIPAQ LHGKTTADGA SQWFGFSTRA RVIVYNKDNV QKQDVDTYEE LGDPKNKGKL CIRSGSHPYN LSLFGAVLEH LGEEKTQAWL KGMVDNMART PKGGDTDQIK GVASGECGIA VTNSYYLARI MRSDKPEDKA IIERVGVVFP NQASWGTHVN IAGGAVAKHA KNQANAVKFL EYLASAPAQD QFANGNNEWP VAKGVKISNP ALQTMTGGSF KSETIPISVV GMNQVKVQQM LDRVGFR
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