| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2706 |
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| Symbol | |
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| ID | 3962992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2979637 |
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| End bp | 2980839 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637917527 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_523952 |
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| Protein GI | 89901481 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.327378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCA AACAAACAAT GGTAAGTCTG TCAGTGGCTG GTGCGTTGTT GGTGATGTCC
GGAAGCGCCG CAGCATCCGG GTTCGCATTG ATCGAACAAA GCGCCAGCGG AATGGGCAAT
GCTTTTGCGG GCGGAGCGGC GATCGCCGAT GATGCCTCGA CGGTGTTCTT CAATCCTGCT
GGGATGTCGC GTTTGAGTGG CAAGCAAATT GCGATCACTG CGCATGCGAT CACACCCTCG
GCTAAATATA CTTCTGCTGC GGGCGTTCCC AGCGGGGGCG ATGCGGGCGG CACCGCGATC
GTCCCGAATG GCTATTTTGT GATGGAAGTG AACCCCGCCC TGAGATTCGG CCTGGGTGTC
AACGCACCGT TCGGGTTGCA GACCGAATAT GACGCGAACT GGGTCGGCAA ACAGCAGGCG
ATCAAGTCAA AGCTCGAAAC CGTGAACGTG AATCCGTCAC TGTCTTACCA GGTTAATGAC
AAGCTGAGCA TTGGTGGAGG ACTGGATTAC CAGCACATCA AGGGCGAATT GTCCCAAGAT
CAAGGGGGCG CTATCGGCGT TGCGGTCATC AATGGCTCCG ACAGTACCTG GGGTTACAAC
CTGGGCGCGT TGTATCAGGT GGATTCCACC ACACGCATCG GAGTGGCCTA TCGTTCCACG
ATGAGCTATA CCTTGAGCGG CTCTGTGGCC ACTTCGCTGC CCTTCGCAAA CGGGCCGGTG
TCGCTAAATA TAAAACTGCC TGACAGCTTG TCAATCAGCG GCTTCCATCA ATACAGTGAT
AAATGGGATG TCATGGCCGA TGTCACGTTT ACGGGATGGA GTTCGTTCAA GCAGGTGAAG
ATTGTGGACG GGACGGGTGT GACCATCTCG AACACGCCTG AAAACTGGAA AGACACCGTA
CGGGTAGCGG TTGGCGCAAC GTATCATTAC AACCAGCACT GGTTGGCCCG TGCCGGCCTG
GCTTATGACC AAGCACCTGT TTCGGATGAA TTTCGAACCG CGCGAATTCC GGACAACAGC
CGCACTTGGC TGTCATTTGG CGGACAGTAC AAGCCGTCGG TGACCAGCGC GATTGATGTC
GGGTATTCAC ATTTATTCCT GAGAGATTCC TCGATCAACT CGCCAACGCC TGCCCCTGCT
CTGGTTGGAA CATACAAGAA CGCGGTCGAT ATCCTCAGTG TGCAATATAC CTATAGCTTT
TAA
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| Protein sequence | MKFKQTMVSL SVAGALLVMS GSAAASGFAL IEQSASGMGN AFAGGAAIAD DASTVFFNPA
GMSRLSGKQI AITAHAITPS AKYTSAAGVP SGGDAGGTAI VPNGYFVMEV NPALRFGLGV
NAPFGLQTEY DANWVGKQQA IKSKLETVNV NPSLSYQVND KLSIGGGLDY QHIKGELSQD
QGGAIGVAVI NGSDSTWGYN LGALYQVDST TRIGVAYRST MSYTLSGSVA TSLPFANGPV
SLNIKLPDSL SISGFHQYSD KWDVMADVTF TGWSSFKQVK IVDGTGVTIS NTPENWKDTV
RVAVGATYHY NQHWLARAGL AYDQAPVSDE FRTARIPDNS RTWLSFGGQY KPSVTSAIDV
GYSHLFLRDS SINSPTPAPA LVGTYKNAVD ILSVQYTYSF
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