Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2588 |
Symbol | |
ID | 3961996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2849299 |
End bp | 2850171 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637917406 |
Product | inner-membrane translocator |
Protein accession | YP_523835 |
Protein GI | 89901364 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAT TGATACTTCA AGCGCTTTAC TCAGGGGTGC TACAGGGCGG CTCGTACGCT TTGATAGCGC TCGGATTGGC GCTGGTTTTC GGTGCAATGA AAGTGATCAA CCTGGCACAT GGAGAACTCG TGCTGTTGTC GGCTTACGTT GCCTACTCGG TGGAGTCGGG CCTGGGCTGG AATCCGATTT TTGCCATACC CATTGCGCTG GTGGTGGTCT GCCTAGCATC GGTGATGGTT TACTTCGTGG TCGGGCGCAT CAAAAAAGAC CGGGAGATCA ATTCGTTAAT CCTCACTTAC GGCATTGGCG TGATTCTCAC CAATTTGATT CTATTGATCT GGAAGGCGGA TGTGCGCTCA ACCGGCTCCA CCTGGCTGCA GGAGGCCATT GTCATTGGTC CCTTTTACAG CATGCGAAGT GAGGTGCTGT TCTTCATCGT CAGTTTGGTC ATGATGGGCG GGCTTTGGTG GTGGCTGTCC CGCAGCTGGT ACGGTCGTGC CGTGCGCGCC GTGTCGAGCA ACCGTGATGC CGCCAAACTC ATGGGCATTG ATCCCGGCTA CACGGAGTTG GTGTCATTCG TCGTGGCAGG CATTCTTGCG GCCGTTGCGG GCGTTGCGCT ATTTAGTTAC GGAGTCGTTA GCCCTGCCTA TGGCAGTGTA CTGACGGTCA AGGCATTCAT CATCACCGTA CTGGCTGGCA TCGGTTCCAT ACCCGGTGTT CTGATCGGCG CCGTGCTGCT GGGCGTCGCT GAAGCGTTGA CGGTCACGCT GGCGAGTTCG GCCTTGCAGG AACTGGTGGG TATGGGATTA TTTCTTCTTG TTCTGTTCGT CATGCCGAGC GGACTTTTCG GTGCGAAAGG ACGGCGAGGA TGA
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Protein sequence | MTELILQALY SGVLQGGSYA LIALGLALVF GAMKVINLAH GELVLLSAYV AYSVESGLGW NPIFAIPIAL VVVCLASVMV YFVVGRIKKD REINSLILTY GIGVILTNLI LLIWKADVRS TGSTWLQEAI VIGPFYSMRS EVLFFIVSLV MMGGLWWWLS RSWYGRAVRA VSSNRDAAKL MGIDPGYTEL VSFVVAGILA AVAGVALFSY GVVSPAYGSV LTVKAFIITV LAGIGSIPGV LIGAVLLGVA EALTVTLASS ALQELVGMGL FLLVLFVMPS GLFGAKGRRG
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