Gene Rfer_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2588 
Symbol 
ID3961996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2849299 
End bp2850171 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content56% 
IMG OID637917406 
Productinner-membrane translocator 
Protein accessionYP_523835 
Protein GI89901364 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAT TGATACTTCA AGCGCTTTAC TCAGGGGTGC TACAGGGCGG CTCGTACGCT 
TTGATAGCGC TCGGATTGGC GCTGGTTTTC GGTGCAATGA AAGTGATCAA CCTGGCACAT
GGAGAACTCG TGCTGTTGTC GGCTTACGTT GCCTACTCGG TGGAGTCGGG CCTGGGCTGG
AATCCGATTT TTGCCATACC CATTGCGCTG GTGGTGGTCT GCCTAGCATC GGTGATGGTT
TACTTCGTGG TCGGGCGCAT CAAAAAAGAC CGGGAGATCA ATTCGTTAAT CCTCACTTAC
GGCATTGGCG TGATTCTCAC CAATTTGATT CTATTGATCT GGAAGGCGGA TGTGCGCTCA
ACCGGCTCCA CCTGGCTGCA GGAGGCCATT GTCATTGGTC CCTTTTACAG CATGCGAAGT
GAGGTGCTGT TCTTCATCGT CAGTTTGGTC ATGATGGGCG GGCTTTGGTG GTGGCTGTCC
CGCAGCTGGT ACGGTCGTGC CGTGCGCGCC GTGTCGAGCA ACCGTGATGC CGCCAAACTC
ATGGGCATTG ATCCCGGCTA CACGGAGTTG GTGTCATTCG TCGTGGCAGG CATTCTTGCG
GCCGTTGCGG GCGTTGCGCT ATTTAGTTAC GGAGTCGTTA GCCCTGCCTA TGGCAGTGTA
CTGACGGTCA AGGCATTCAT CATCACCGTA CTGGCTGGCA TCGGTTCCAT ACCCGGTGTT
CTGATCGGCG CCGTGCTGCT GGGCGTCGCT GAAGCGTTGA CGGTCACGCT GGCGAGTTCG
GCCTTGCAGG AACTGGTGGG TATGGGATTA TTTCTTCTTG TTCTGTTCGT CATGCCGAGC
GGACTTTTCG GTGCGAAAGG ACGGCGAGGA TGA
 
Protein sequence
MTELILQALY SGVLQGGSYA LIALGLALVF GAMKVINLAH GELVLLSAYV AYSVESGLGW 
NPIFAIPIAL VVVCLASVMV YFVVGRIKKD REINSLILTY GIGVILTNLI LLIWKADVRS
TGSTWLQEAI VIGPFYSMRS EVLFFIVSLV MMGGLWWWLS RSWYGRAVRA VSSNRDAAKL
MGIDPGYTEL VSFVVAGILA AVAGVALFSY GVVSPAYGSV LTVKAFIITV LAGIGSIPGV
LIGAVLLGVA EALTVTLASS ALQELVGMGL FLLVLFVMPS GLFGAKGRRG