| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2576 |
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| Symbol | |
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| ID | 3961984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2836508 |
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| End bp | 2837698 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637917395 |
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| Product | esterase, PHB depolymerase |
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| Protein accession | YP_523824 |
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| Protein GI | 89901353 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.225739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA CCCTTCAGGA ACTGATGCGC ACCGCCACAC AATTAACGCA GTCGGGCCGC
TTGAATGAAG CGACCCAGGC CATCCAAAGT GCGTTGCGTG GCACGGCCGC CGTGAGTGTT
GCGCCCGGTC CCGTCAACCC GTGGGCGGAT GCCGGGTCTT ACCTGCTCCC CGGCGCCGCG
ATGCAGATGC CGTCACCGTG GATGCTGGAT GGCCGTGCGT CCAAGGTGGA TGCGCGCAAG
CCGGGCGCCC CCGATGCCGG CGGCGGCCAG TTCATCAGCG GCACACACAC CCATGCGGCG
TTGACGTGCC ACTTCAAGCT CTACATACCG CCGGGTCGTG CCGGCAAAGC AATGCCGCTG
GTGGTGATGC TGCACGGCTG CACCCAGGAC CCGGATGATT TTGCCGCGGG CACCGCCATG
AATGAGCGCG CCCGCGAGCA GGGCTTCTTC GTGCTGTACC CGCAGCAGTC CCCGGACCTT
AACCCGTCAC GCTGCTGGAA CTGGTTCGAG CACAAGCACC AGGAGCGCGG ACGGGGTGAA
CCGGCCCTGA TCGCCAGCCT GACGCAGGCG GTGATCCAAC AGCACGGCAT TGATACGCGT
CGCGTTTATA TCGCCGGTTT GTCGGCCGGT GGTGCGATGG CCGTCATCGT CGCGGCGGCC
TACCCGGAGC TGTTTGCGGC CGTCGGCGTT CACTCGGGCC TGCCCAGTGG CGCCGCGAGC
AATGTGGCGG AGGCGCTGAT GGTGATGAAG AGCGGCCAGG TTGGCATCGT CGAGCGGGCC
TGGGGCGGCC GTGCCGACGC GGCCGCGAAA GCGCTGCTAG AGCCGCCGAT GCCCATACCC
ACCATCGTGT TTCACGGTGA CCAGGACCAG ACTGTGCATC CGCGCAATGG CGAGCAGGTG
ATTGCCGCTG CCTTGGGTGC TGCCGCCGGT GCGCAGGACT CGCATGCGCG CCCCTCAGGC
AATGCGAGGG TGGAGCAGGG TGTCTCGGCC CAGGGGCGGC GCTACACACG TTCCACCCAG
CATGGCGACC AGGGCCAGGC TTTGACCGAG CACTGGCTGG TGCATGGGGC CGGGCACGCA
TGGTCGGGTG GCCACGCCAG TGGTTCGTAC ACGGATGCGA GCGGCCCCGA TGCCACGCTT
GAAATGCTGC GTTTCTTCTT TGACCACCCC AAGACGCGTG GCAATGTTTA A
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| Protein sequence | MNKTLQELMR TATQLTQSGR LNEATQAIQS ALRGTAAVSV APGPVNPWAD AGSYLLPGAA
MQMPSPWMLD GRASKVDARK PGAPDAGGGQ FISGTHTHAA LTCHFKLYIP PGRAGKAMPL
VVMLHGCTQD PDDFAAGTAM NERAREQGFF VLYPQQSPDL NPSRCWNWFE HKHQERGRGE
PALIASLTQA VIQQHGIDTR RVYIAGLSAG GAMAVIVAAA YPELFAAVGV HSGLPSGAAS
NVAEALMVMK SGQVGIVERA WGGRADAAAK ALLEPPMPIP TIVFHGDQDQ TVHPRNGEQV
IAAALGAAAG AQDSHARPSG NARVEQGVSA QGRRYTRSTQ HGDQGQALTE HWLVHGAGHA
WSGGHASGSY TDASGPDATL EMLRFFFDHP KTRGNV
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