Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2565 |
Symbol | |
ID | 3960895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2826450 |
End bp | 2828180 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637917384 |
Product | hypothetical protein |
Protein accession | YP_523813 |
Protein GI | 89901342 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.333323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAC AAAACTTTAT CCCCGGCAAA GATGCCTCTC TTGAATCCAC CATCAATAAC CATCAAACCA GGCTGCAGGC GCTTGGTTTT CATATTGAGG AGCGCTCCTG GCTGAATCCG GTGGACGGCA TCTGGTCGGT GCATATTCGC GACCGCGATT GCCCGCTCAT GTTCACCAAC GGCAAAGGCG CCACCCGGCT GGCCTGTCTG GCCAGCGCCC TGGGCGAATT TTTTGAGCGG CTCTCAACCA ATTATTTCTG GACGCATTAC TACCTGGGCC CCGATATTGC CAACCGGCCC TATGTGCATT ACCCACAGGA GCGCTGGTTT GCACCCGGTG AAGACGGCAG TTGGCCCCCT GAGTTGCTCA ACGCTGATTT GCATCGGTTT TACAACCCCG AAGGCGGTAT TGAAGCCAGC AGCCTGGTGG AGTTCAACTC CGGCAATGCC GAGCGCGGCA TTTGCGCCAT TCCCTATGTG CGCCAGCGCG ACGGCGCGGT GACCTACTTC CCGGTCAATG TGATTGGCAA TTTGTACGTC AGCAACGGCA TGTCGGCCGG CAACACGCAG GCGGAGGCGC GCACGCAAGC CTTGTCGGAG ATATTTGAGC GCCACGTCAA GGCCCGCATC ATCAGCGAAG GCATTTGCCT GCCCGATGTG CCGCAGGCCG TGATTGCACG TTATCCGCGC ATTGCGGCTG GTATTGCGGC ACTGCGCGCA GCCGGCTTTG GCATTCTGGT CAAAGATGCC TCGCTGGGCG GCCAATACCC GGTGATGAAT GTGACGCTGT TGCACCCCGA AGACCAGGGT TGCTTTGCCA GTTTTGGCGC CCACCCGCGC TTTGAGATTG CGCTGGAGCG TGCGTTGACC GAGCTGCTGC AGGGCCGTGC GCTGGATTCG TTGGCAGGCT TTCCGGCACC GGGCTTTGAT CTGGAAGAGG TTGGCAGCTC CACCAACATC GAAATCCATT TCGTCGATTC CAGCGGTGTG ATTCACTGGA AATTTTTGGG CGACGAGCCG GATCACGCGT TTGTCGACTG GAACTTCAGC AACACCACGG CCGAGGATTA CGCCTGGGCG GTGGATCGCA TTCACAAGGA CGGGCGCGAC ATCTACATTG CCGACTTCAC CCACCTGGGC GTCTATGCCT GCCGCATTCT GGTGCCGGGC ATGTCCGAGA TTTATCCGGT CGATGACCTG GCGTTTGAGA ACAACAGCGT GGGCAACAGC ATCCGCGAGG CGATTTTGAA TCTGCCCGAT CTCGACGACG AAGAATGTTC AGACCTGCTC GATACGCTCA ACGAGTCGGC GCTGGCCGAT CAGCGCCCGG TGGCCGGCGT GATCGGGCTG GCCGCCGATG CCGGCTCTTT CTGGAGCGAC TTGCGCGTGG GCGAGCTCAA GACCCTGCTG GCGCTGGCCA TTGGTGATGA AGCGGCCACG CTGGAGGGCT GCGACTGGAT CAAGCACTTT GCGCAGCTCA ACCCGCAACG GCGCGCGGTT TACGCCTGCA TCGAGAGCAT CATCAATCTG GCCGAGATGG GTGACAGTGG ACCGTATATG GACGCCTTGC GCCAGTTGTA CGGTGCCGGG GCCGTGGCGC AGGCGCACGC GCTCATCATG CAGACCGACC GTTTCATGGG TTTGAATGCG CCGGGCCTGG CGCTTGATGG TTGTGAAATG CACCACAAGT TGTTGGCGGC TTATGACAAG GTGCGTGCCA GCCATGCGTG A
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Protein sequence | MQTQNFIPGK DASLESTINN HQTRLQALGF HIEERSWLNP VDGIWSVHIR DRDCPLMFTN GKGATRLACL ASALGEFFER LSTNYFWTHY YLGPDIANRP YVHYPQERWF APGEDGSWPP ELLNADLHRF YNPEGGIEAS SLVEFNSGNA ERGICAIPYV RQRDGAVTYF PVNVIGNLYV SNGMSAGNTQ AEARTQALSE IFERHVKARI ISEGICLPDV PQAVIARYPR IAAGIAALRA AGFGILVKDA SLGGQYPVMN VTLLHPEDQG CFASFGAHPR FEIALERALT ELLQGRALDS LAGFPAPGFD LEEVGSSTNI EIHFVDSSGV IHWKFLGDEP DHAFVDWNFS NTTAEDYAWA VDRIHKDGRD IYIADFTHLG VYACRILVPG MSEIYPVDDL AFENNSVGNS IREAILNLPD LDDEECSDLL DTLNESALAD QRPVAGVIGL AADAGSFWSD LRVGELKTLL ALAIGDEAAT LEGCDWIKHF AQLNPQRRAV YACIESIINL AEMGDSGPYM DALRQLYGAG AVAQAHALIM QTDRFMGLNA PGLALDGCEM HHKLLAAYDK VRASHA
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