| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2561 |
|---|
| Symbol | |
|---|
| ID | 3960891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2822344 |
|---|
| End bp | 2823522 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637917380 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_523809 |
|---|
| Protein GI | 89901338 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.306934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGACA TCGTGATTGT TTCGGCCGCA CGCACGGCCG TGGGCAAATT TGGTGGCACC
CTGGCCAAAA CGCCAGCACC CGAGCTGGGT GCCGCCGTCA TCAAAGCCTT GCTGGCGCGC
ACGGGCTTGA GCGCGGATCA GATTGGTGAA GTTATTTTGG GCCAGGTGCT GACGGCCGGT
TCGGGTCAAA ACCCGGCCCG CCAGGCGCTG ATCAAGAGTG GCTTGCTGAT TGAAACCCCG
GCACTGACCG TGAACTGCGT CTGCGGCTCC GGCCTGAAGG CTGTGATGCT GGCCGCGCAA
GCGGTGGCTT ACGGCGACAG CGACATTGTG ATTGCGGGCG GCCAGGAAAA CATGAGCGCG
TCACCCCATG TGTTGCTCGG CTCGCGGGAC GGTCAGCGCA TGGGCGACTG GAAGATGATC
GACTCCATGA TCGTCGACGG CTTGTGGGAC GTCTACAACC AGGTCCACAT GGGTATCACG
GCTGAAAACG TCAACAAGAA ATACGGCATC ACGCGCGAAA TGCAGGACGC GCTGGCATTG
GGTAGCCAGC AAAAGGCCGC CGCTGCGCAA GACGCCGGCA AGTTCAAGGA CGAAATCGTG
CCGCTCAGCA TTGCCCAGAA GAAGGGCGAT GCGATTGTCT TTGACACCGA CGAGTTCTTG
AACCGCAAGA CCAACGCGGC CGCTCTGGCC GGTCTGCGTC CCGCCTTTGA CAAGGCCGGC
AGCGTGACCG CCGGCAATGC CTCCGGCATC AACGACGGCG CCGCTGCCGT GATGGTGATG
ACGGCCAAGA AAGCCGCCGC CCTGGGGCTC AAACCACTGG GCCGCATTGC CAGCTTTGCC
ACCTCCGGTG TCGATCCGGC CCTGATGGGC ATGGGCCCGG TGCCGGCGTC TCAAAAAGCG
CTGGCGCGCG CGGGCTGGAA GGCCGCCGAC CTTGACCTGA TGGAAATCAA CGAAGCGTTT
GCAGCGCAGG CTTGTGCCGT CAATCAGCAA ATGGGTTGGG ACACCTCCAA ACTCAACGTT
AACGGCGGTG CGATTGCCAT CGGGCACCCG GTGGGTGCGT CCGGTTGCCG TATTTTGGTC
ACGCTGTTGC ATGAAATGCA GCGCCGCGAC GCCAGGAAGG GCCTTGCTTC TCTGTGTATT
GGCGGTGGCA TGGGCGTGGC GCTGACGATC GAGCGTTAA
|
|---|
| Protein sequence | MEDIVIVSAA RTAVGKFGGT LAKTPAPELG AAVIKALLAR TGLSADQIGE VILGQVLTAG
SGQNPARQAL IKSGLLIETP ALTVNCVCGS GLKAVMLAAQ AVAYGDSDIV IAGGQENMSA
SPHVLLGSRD GQRMGDWKMI DSMIVDGLWD VYNQVHMGIT AENVNKKYGI TREMQDALAL
GSQQKAAAAQ DAGKFKDEIV PLSIAQKKGD AIVFDTDEFL NRKTNAAALA GLRPAFDKAG
SVTAGNASGI NDGAAAVMVM TAKKAAALGL KPLGRIASFA TSGVDPALMG MGPVPASQKA
LARAGWKAAD LDLMEINEAF AAQACAVNQQ MGWDTSKLNV NGGAIAIGHP VGASGCRILV
TLLHEMQRRD ARKGLASLCI GGGMGVALTI ER
|
|---|
| |