Gene Rfer_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2508 
Symbol 
ID3962942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2770504 
End bp2770989 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID637917327 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_523756 
Protein GI89901285 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.116362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGGTT TGGTGCGCGA CCCGATCACC GCTTACATAG CGCTCGGCGC CAATCTGGGT 
GACGCCCGTG CTGCGGTGCT GCGGGCCATG CGCGTCATCG CTGCGTTGCC AGCGACGACG
CTGGTGCGGC GTTCTTCGCT GTACCGCACG GCACCCGTAG AGGCCATGGG GCCGGATTAC
ATCAATGCCG TCGTTGAAGT GGCCACCGGC TTGCACCCGC TGGAGCTGCT GCTTGAATTG
CAGCAACTGG AACAGGCTGC CGGCCGCGAG CGCCCATACC GGAATGCCTC GCGCACCCTG
GACCTGGACA TCCTGCTGTA TGGGGAGGCC AGCATGGACA GTCCCACCCT CGTTATTCCC
CATCCCCGGA TGATGGCGCG CGCGTTCGTG CTGGTGCCAC TGGCCGAGAT CGCGCCATTG
AGGGTGAGCT CAGATCAGTT GCGGGCCGTC TCAGATCAAG CCGTCAAGCT TGTGACGGAC
TGCTGA
 
Protein sequence
MSGLVRDPIT AYIALGANLG DARAAVLRAM RVIAALPATT LVRRSSLYRT APVEAMGPDY 
INAVVEVATG LHPLELLLEL QQLEQAAGRE RPYRNASRTL DLDILLYGEA SMDSPTLVIP
HPRMMARAFV LVPLAEIAPL RVSSDQLRAV SDQAVKLVTD C