| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2486 |
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| Symbol | |
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| ID | 3962979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2744961 |
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| End bp | 2747111 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637917305 |
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| Product | histidine kinase |
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| Protein accession | YP_523734 |
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| Protein GI | 89901263 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCCAA ATAATCAGGA TATTCGCAAC CGCCTGCTGG TGGCCCGGTT GCCGTCGATG
CCACAGATCC TCCTCAAGTT GATCGAACTG TGTCAGGCCG ACGAAGCGGG CATGGCTGAA
CTCGCCAAAC TGATCGCCAA CGATGCGGGT ATGACCGCCA AGGTGCTGAG CGTTGCCAAT
AGCGCCGCCT ACCACCGCGG CGGCAACAAA GTGGGACTGC TTCAGGCGCT GGGCGTTCTG
GGCTCAGACA TGATCAAGAC CCTGGTCATC AGCGAGTCGG TGTTCCAGAC CTTCAGTGGA
TTTCCGCATT CCGGCAGCAC GGATCTGCGC AGCTTCTGGA AGCACTCCTT GACCACCGCC
GTCGTGGCGC GCGAGATCGC AAAAAAAATG GCCTATCCGC ACGCCGAAGA AGCCTATCTG
GCAGGCCTGT TGCACGATGT GGGCCGTCTG GCTTTATTGG CCGCGGCACC CAACGAATAC
GGCTTCAATT TTCTGGCGCA GGACGACGCA AGCCTTTGTG CCGTTGAGCA GCACACACTT
CAGATTTCCC ATGCTGACGC CGGGGCCTGG TTGATCGAAC GCTGGAACCT GGACTCGTTC
ATGGCCGACA GCATCCTCTA CCACCACGAG TCCACGATGC GCCTTGAGGC AGCGCATCCC
CTGATTCGCA TCATCCATCT TGCGCAACTG CTGAGCAACC ATGACCCTGC GCTGCCCCTT
TCAGCCAATG CGGGCTCGCT TTGCAAGATC AACCTGGACG ACCTGTCGCT CATTTGCGAT
GGAGCAGCAG CCCAGGTGAA AAAGGCAGCC GAATACCTGG GCATTGACCT GTCGGGCGTA
GATGACCTGG TGGCGCCGCC AGCCCGCGCG CTCGCCGCGC CGGTGGCCGA TCCGGCACAG
CAACGCCTGA CCGAGGAGGT GCGCAACATG GCGCTGAGTG CCGAGCTCGG GCAATCGTTT
GCGCGCCAAA AGGGTGACAC TCAATTGCTC GACGTTGTTC GGCAAAACGC GCGCATTCTC
TTCAATCTCG AAAATACGAT CATCTTCCTG ATGAACGGAA GCGGTCAGGC CCTGGTGGGC
GTGTCGTTCG CAGAGCAGCA ACAACGACTG GCCGAATTCT CCATCGCGAT GTCCGGCGGT
GGCGGCATAG CCGGGTCTGC GCTTCAGAGG CGCCTGGTTT TTCTTGAACG CGACGGCACT
CGGCAAGGCC TTGCAGAAGA GCAGTTAATG CGTATTTTTG ATGCCGACTG TCTGGTTTGT
GTGCCTATTG CAAGCGCCTC ACGCTGCCTG GGAATGATGG TGGGCGGCGT TCCCGCATGG
CGAATCGCCG AATTGAAGTA CCGCGAGAAG TTTTTGCAGT CCTTTGGCGC CCAGGCGGCC
ACAGCGCTCG AGGCGGCGAC CCGGGACCGA GGTGAAATCG ATCAGCGTAT CGCCAGTTTG
AAGGAAGATT ATCGCGAAAG CTCCCGCAGA GTGGTGCATG AGGTCAACAA CCCGCTGTCG
ATCATCAAGA ACTACCTTGG CGTACTGGAC GACAAATTGA CGCGCCAGGA ACCGGTGGCG
GACGAGTTGC TGATTCTCAA TGAAGAGATT GACCGGGTTG GCAACATCAT CAACGAATTT
GCCGGGGTCG CTCCGAAAAC TCAGGCCGGC GCAACTGAAA TCAACCGAGT CGTCAACGAT
CTGGTGCGCC TGTTTCGTGA AAGCAGATTC CTGCCACCTT CGGTGCAGAT CGTGGCTCGG
ATGCCGGAGC AAATCGCCGA GATCAATGGC TCGGCTGACA TTCTCAAGCA GATTCTGGTG
AACTTGCTCA AGAATGCCGT TGAGGCGCTG CCCAGGGGCG GCCATATCGA GATCGACAAC
AAGGGCTGCG TCCAACGCGA CGGACGCGCA TTTTTCGAGT TGTGCATCAA GGACGATGGA
CCCGGCATTC CAGCCGAGGT ACTGGCCAAG CTGTTTTCCC CGGTTCGCAG TTCCAAGGTG
GGCCAGAACC GTGGCATCGG TTTGAGTATT GTTCACAGCC TGGTCAAAAA GCTCGACGGC
CTGATCAGTT GCCAAAGCAC CGGGGCGGGT ACGGCTTTTG AAATTCTCCT GCCAGCCCGC
AATGCCGCGG CTCAGGGCGC TGCTGCGTTG TCCATCAAGG CGTTGGCATG A
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| Protein sequence | MSPNNQDIRN RLLVARLPSM PQILLKLIEL CQADEAGMAE LAKLIANDAG MTAKVLSVAN
SAAYHRGGNK VGLLQALGVL GSDMIKTLVI SESVFQTFSG FPHSGSTDLR SFWKHSLTTA
VVAREIAKKM AYPHAEEAYL AGLLHDVGRL ALLAAAPNEY GFNFLAQDDA SLCAVEQHTL
QISHADAGAW LIERWNLDSF MADSILYHHE STMRLEAAHP LIRIIHLAQL LSNHDPALPL
SANAGSLCKI NLDDLSLICD GAAAQVKKAA EYLGIDLSGV DDLVAPPARA LAAPVADPAQ
QRLTEEVRNM ALSAELGQSF ARQKGDTQLL DVVRQNARIL FNLENTIIFL MNGSGQALVG
VSFAEQQQRL AEFSIAMSGG GGIAGSALQR RLVFLERDGT RQGLAEEQLM RIFDADCLVC
VPIASASRCL GMMVGGVPAW RIAELKYREK FLQSFGAQAA TALEAATRDR GEIDQRIASL
KEDYRESSRR VVHEVNNPLS IIKNYLGVLD DKLTRQEPVA DELLILNEEI DRVGNIINEF
AGVAPKTQAG ATEINRVVND LVRLFRESRF LPPSVQIVAR MPEQIAEING SADILKQILV
NLLKNAVEAL PRGGHIEIDN KGCVQRDGRA FFELCIKDDG PGIPAEVLAK LFSPVRSSKV
GQNRGIGLSI VHSLVKKLDG LISCQSTGAG TAFEILLPAR NAAAQGAAAL SIKALA
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