| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2468 |
|---|
| Symbol | |
|---|
| ID | 3960283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2715585 |
|---|
| End bp | 2715932 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637917287 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_523716 |
|---|
| Protein GI | 89901245 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4654] Cytochrome c551/c552 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.202233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTTA TCAGCTTTAA GCCAACCGAT AAGGTGTCAA TGATTAAACG TTCCATTCTC
GCTTTAATTG CCGCTGTCGC GGTAACTCTT CCTGCATGGG CCGATCTGGC GCTTGCCAAA
TCCAAGAATT GTTTGGCCTG TCATACCGTC GACAAAAAAT TGGTGGGTCC GGCGTATCAG
GATGTTGCGA AGAAATACGC CGGTCAAAAA GACGCGGCCG GCAAGCTGGC AACAAAAATC
ATGAAGGGCG GCTCTGGCGT CTGGGGTGCG GTGCCGATGC CGGCCAATAC GCAGGTCAAC
GAAGCGGAAG CCAGAAAACT GGCAGAGTGG GTTCTGAGCC TGAAATAA
|
|---|
| Protein sequence | MAFISFKPTD KVSMIKRSIL ALIAAVAVTL PAWADLALAK SKNCLACHTV DKKLVGPAYQ
DVAKKYAGQK DAAGKLATKI MKGGSGVWGA VPMPANTQVN EAEARKLAEW VLSLK
|
|---|
| |