| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2464 |
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| Symbol | |
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| ID | 3960279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2712460 |
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| End bp | 2713536 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637917283 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_523712 |
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| Protein GI | 89901241 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.112989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCG TTATTTTGGG TGCCGGTCTG ATGGGGCGCT TGCTCGCGTG TGAATTGGCC
CGTGCAGGTC ACCAGCTTGA ATTATTTGAT GCGGGTGGCC CCGAGGCGCT GAACTCGGCG
GCCCGTGCCG CGGCAGCCAT GTTGGCACCG CTGGCGGAGT CGGCCGTCGC CGAGGACCCG
GTGGTGAAAA TGGGCGTGTA CGGGCTCGGC CGCTGGCCTG CGCTGATTGC GCAACTCGAT
GAGCCGGTGT TCTTTCAGCA GCAGGGCACG ATGGTGGTCT GGCATCGGCA AGATGTGGCT
GAGGCAACAC GCTTTTCACG CCAGCTTGAT GCCACGGCGC AACGCCTGCC AACGCTGCCC
ATAGCGCAGC CGCTGGATGC GTCGGGCATC GCTCGGTTGG AGCCCTGTCT GGCTGCGCAT
TTTTCACAAG GCCTCTACCT GCCGGGCGAA GGCCAGTTGG ACAACCACCA GTTGCTCGCC
GCCACGCTGC ATCAACTCCA GCGACTGCAG GTGACGATTC ACTGGAACAG TCCACGCGTC
CTCAGCGACT TCTCCCCGGG GCAGCCGGGG CAGCCCCACT GGGTATTTGA CTGCCGGGGC
TTGGGTGCGC ACCCGCAGTG GTCCGCGTTG CGTGGCGTGC GCGGCGAGAT CATCACGCTG
CTGGCGCCGC ACGTGAAACT GTCGCGCCCC ACGCGACTGC TCCATCCGCG CTACCCGATC
TACATTGCGC CCAAACAAGA CGGCTATTTT CTGGTCGGCG CCACCGAAAT TGAGTCCGAT
GACCTCTCAC CGATGAGCGT GCGCTCAGCG CTGGAGCTGC TCGGCGCCGC CTATACGGTG
GACAGTGGTT TTGCCGAGGC GCGCATTGTG GAATTGGTCG CCCAGTGCCG CCCAGCCTTG
CCCGACAACC TGCCCTGCAT CCGCCAGTTG GGCCCGCGCG TGATGCAAAT CAACGGCCTC
TATCGCCACG GCTACCTGAT GGCCCCGGCC CTGCTGGATG TGGCGCTGGA ACTGTTTGAA
ACCGGCGCAT CGCCGCTGGC GAACGATTTT GCCCTGTCGA TCCACCAATT GCCATGA
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| Protein sequence | MNIVILGAGL MGRLLACELA RAGHQLELFD AGGPEALNSA ARAAAAMLAP LAESAVAEDP
VVKMGVYGLG RWPALIAQLD EPVFFQQQGT MVVWHRQDVA EATRFSRQLD ATAQRLPTLP
IAQPLDASGI ARLEPCLAAH FSQGLYLPGE GQLDNHQLLA ATLHQLQRLQ VTIHWNSPRV
LSDFSPGQPG QPHWVFDCRG LGAHPQWSAL RGVRGEIITL LAPHVKLSRP TRLLHPRYPI
YIAPKQDGYF LVGATEIESD DLSPMSVRSA LELLGAAYTV DSGFAEARIV ELVAQCRPAL
PDNLPCIRQL GPRVMQINGL YRHGYLMAPA LLDVALELFE TGASPLANDF ALSIHQLP
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