| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2384 |
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| Symbol | |
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| ID | 3962835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2624361 |
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| End bp | 2626217 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637917202 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_523632 |
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| Protein GI | 89901161 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.225519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTGC GTTCCACGGT TGATTTCCTG CTGTACCAAT GGCTCGATGC CGAGTCGCTG
AACGAGCGGC CGCGTTTTGC CGACCATTCG CGCGAGACTT TTGATGCCGT GCTCGACACC
TGCGAGCGTA TTGCGCGTGA AAAGTACGCG CCGTTCAACC GGCTGGTGGA CACGCAGGAG
CCGCGTTTTG ACGGCGACCA GGTGATCCTG CCGCAGGCCA CGCATGACGC ACAAAAGGCC
TACGCTGAAT CCGGCATGTT GAGCGCGGCG CAAGATTTTG AGCACGGTGG CATGCAACTG
CCGTACACGA TTGAGGCGGC GGCGAATGCT TTTTTTGCCA TGGCCTCGGT CAGTATCGGC
TCGGGCATGC TCAGCACCGG CAACGCCAAT TTGCTGATGG TGCATGGCAC GCCGCTGCAA
AAAGAGGTGT TTGCCAAGAA TGAATTCTGC GGGCGCTTCT CGGGCACCAT GTGTTTGTCT
GAGCCGCAGG CAGGGTCTTC TCTGAGTGAT GTGGCCACGC GCGCCATGCC GGACGGCGAG
GACTATGCGC AGGATCCGCT CGGTGCGCGC TATCGCCTGC GCGGCAACAA GATGTGGATC
TCGGCTGGCG ACCACGAGTT GACTGAGAAC ATCATCCACT TGGTGCTGGC CAAGATTCCG
GGACCGGACG GCCAGTTGCC GACGGGCACG CGCGGCATTT CCCTGTTCAT CGTGCCCAAA
AAATTGGTGA ACGAGGCGGG CGTTCTTACC GGCGAGCGCA ACGACGTGGC CCTGGCGGGT
CTGAATCACA AACTGGGCTG GCGCGGCACG GTCAACACAT TGCTCAATTT TGGCGAGGGC
AAATACCCGG TTCGCAGCAC AGGCGGTGGA CTCGATGGCA AGGGCGCCGG CGCCGTCGGT
TACCTGGTCG GCCAACCGGG CGAGGGCTTG CGCTGCATGT TCCACATGAT GAACGAGGCG
CGTATCGGCG TCGGCATTGC AGCCACCATG CTCGGTCTGG CGGGTTATGA AGCTGCGCTG
GACTATGCCA AAACCCGACC CCAGGGTCGG CCGGCGGGGC CCGCCGGCAA AGATGCCACC
CAGCCGCAAG TGCCCATCAT TGAGCATGCC GACGTCAAGC GCATGTTGCT GGCGCAAAAA
TCTTACTGTG AAGGTGCGTT GGCGCTGGAG TTGTATTGCG CTCGTCTGGT CGATGAACAA
CACAGCGGTA CACCCGAGGC CGCCGATGAG GCACGCCTGC TGCTTGAAGT TCTGACCCCG
ATCGCCAAGA GCTGGCCGAG TGAATGGTGT CTGGAGGCCA ATTCGCTGGC GATTCAGGTC
CACGGGGGTT ATGGCTACAC GCGTGACTTC CCGGTAGAAC AGTATTGGCG CGACAACCGT
CTGAACATGA TCCACGAAGG CACGCACGGC ATTCAGGCGA TGGACTTGCT CGGACGCAAA
GTGCTGATGG AGAGCGGGCG CGGGCTGGCG CTGCTGGCAG GGCGCATCCA GGCCACGGCC
GCGCAGGCTC AACAGGTGCC TGAACTGGCG GCGCACGCAG CGGCTTTGAC AGCCGCTTGG
CAGCAGGTCA CAGACGCCAC CCGGGCGGCC TGGGCCACTG GCCAGCCGGG TGACGCCCTG
GCCAACGCGG TGCCGTATCT GCAGGCCTTT GGGCATACCG TGCTGGCCTG GATCTGGCTC
GACGTGGCGT TAAGCGCGCA ACGCCAGGAT GCTACACAAT CAATAGCCGC TAACGTAGGA
AGGACGAGGG CTACAGCCTA TTTTTATCAT TACGAGTTGC CCAAAATAGG CGCGTGGCTG
CAGGTGGTGG CCAACCGTGA CCTGACCTGC GCCGACATGC CTGAAGACGC GTTCTGA
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| Protein sequence | MSLRSTVDFL LYQWLDAESL NERPRFADHS RETFDAVLDT CERIAREKYA PFNRLVDTQE
PRFDGDQVIL PQATHDAQKA YAESGMLSAA QDFEHGGMQL PYTIEAAANA FFAMASVSIG
SGMLSTGNAN LLMVHGTPLQ KEVFAKNEFC GRFSGTMCLS EPQAGSSLSD VATRAMPDGE
DYAQDPLGAR YRLRGNKMWI SAGDHELTEN IIHLVLAKIP GPDGQLPTGT RGISLFIVPK
KLVNEAGVLT GERNDVALAG LNHKLGWRGT VNTLLNFGEG KYPVRSTGGG LDGKGAGAVG
YLVGQPGEGL RCMFHMMNEA RIGVGIAATM LGLAGYEAAL DYAKTRPQGR PAGPAGKDAT
QPQVPIIEHA DVKRMLLAQK SYCEGALALE LYCARLVDEQ HSGTPEAADE ARLLLEVLTP
IAKSWPSEWC LEANSLAIQV HGGYGYTRDF PVEQYWRDNR LNMIHEGTHG IQAMDLLGRK
VLMESGRGLA LLAGRIQATA AQAQQVPELA AHAAALTAAW QQVTDATRAA WATGQPGDAL
ANAVPYLQAF GHTVLAWIWL DVALSAQRQD ATQSIAANVG RTRATAYFYH YELPKIGAWL
QVVANRDLTC ADMPEDAF
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