Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2319 |
Symbol | |
ID | 3964314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2543370 |
End bp | 2544797 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637917136 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_523568 |
Protein GI | 89901097 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGC AATTTGACGT GATCGTGATT GGTGCTGGCC CCGGCGGCTA TATCGCTGCC ATTCGTGCCG CCCAACTCGG CAAAAACGTG GCCTGTGTGG ATGAGTGGAA AAACAGCAAG GGCGGCCCGG CGCTGGGCGG CACCTGCACC AACACGGGCT GTATTCCGTC CAAGGCCCTG CTGCAGTCGT CGGAGCATTT CGACCATGCC AGCCATCACT TTGCCGAGCA CGGCATCGAG GTCAAAGGCG TGAGCATGGA TGCGGCCAAG ATGGTGGCAC GCAAGGATGC CGTGGTGAAG CAAAACAACG ATGGCATCCT GTACCTGTTC AAAAAGAACA AGGTCAGCTT CTTCCATGGC CGCGCCTCGT TTGTGAAAGC AGTGGAGGGC GGCTACGAAA TCAAGGTGGC AGGCGCTGCC GAAGAAACGC TGCTGGGCCA GCAAGTCATT GTGGCCACGG GTTCTAGCGC CCGCGCGCTG CCGGGTGCGC CGTTCGACGA GAGCCAGGTC CTGTCCAACG AAGGCGCTTT GGCCATGACG GCCGTGCCGA AGAAGCTGGG TTTGATTGGC TCGGGTGTGA TCGGCCTGGA GATGGGCTCG GTCTGGCGTC GTTTGGGTTC TGAAGTGACC ATTCTGGAAG GTCTGCCGGC TTTCCTGGGC GTGGTCGACG CGCAGATTGC CAAGGAAGCG CACAAAGCCT TTGTCAAGCA GGGTCTCAAG ATCGAGCTGG GCGTGACGGT TGGCGACGTC AAGGTCGGCA AAAAAGGTGT CAGCGTCGCC TGGACCAACG CCAAGGGTGA GGCTCAAAAA CTGGACGTGG ACAAGTTGAT TGTGTCAATT GGCCGGGTGC CAAATACCGT CGGCTTGAAC GCCGAAGCCG TCGGCCTGCA ACTCGACGAG CGCGGCGCGA TTGTGGTGGA CGGTGACTGC AAAACCAACC TGCCCGGCGT GTGGGCAGTC GGTGACGTGG TGCGTGGCCC GATGCTGGCG CACAAGGCGG AAGAAGAAGG CGTTGCGGTG GCCGAGCGCA TCGCGGGCCA GCATGGGCAT GTCAACTTCA ACACCATTCC GTGGGTGATT TACACCAGCC CGGAGATTGC CTGGGTGGGA CGCACCGAGC AGCAACTCAA GGCCGACGGC GTGGCCTACA GAGCGGGTAC CTTCCCGTTC TTGGCCAATG GCCGTGCCCG CGCTCTGGGG GACACCACCG GCATGGTCAA AATGCTGGCC GATGCCACCA CGGATGAAAT TTTGGGCGTA CACATTGTCG GCCCCATGGC CAGCGAGTTG ATTGCCGAAT GTGTGGTGGC GATGGAATTC CGCGCCAGCA GCGAGGACAT TGCACGCATT TGCCACGCCC ACCCGACTTT GAGCGAGTCC ACCAAGGAAG CGGCGCTGGC GGTGGACAAA CGCACACTGA ATTTCTAA
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Protein sequence | MSKQFDVIVI GAGPGGYIAA IRAAQLGKNV ACVDEWKNSK GGPALGGTCT NTGCIPSKAL LQSSEHFDHA SHHFAEHGIE VKGVSMDAAK MVARKDAVVK QNNDGILYLF KKNKVSFFHG RASFVKAVEG GYEIKVAGAA EETLLGQQVI VATGSSARAL PGAPFDESQV LSNEGALAMT AVPKKLGLIG SGVIGLEMGS VWRRLGSEVT ILEGLPAFLG VVDAQIAKEA HKAFVKQGLK IELGVTVGDV KVGKKGVSVA WTNAKGEAQK LDVDKLIVSI GRVPNTVGLN AEAVGLQLDE RGAIVVDGDC KTNLPGVWAV GDVVRGPMLA HKAEEEGVAV AERIAGQHGH VNFNTIPWVI YTSPEIAWVG RTEQQLKADG VAYRAGTFPF LANGRARALG DTTGMVKMLA DATTDEILGV HIVGPMASEL IAECVVAMEF RASSEDIARI CHAHPTLSES TKEAALAVDK RTLNF
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