Gene Rfer_2319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2319 
Symbol 
ID3964314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2543370 
End bp2544797 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content61% 
IMG OID637917136 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_523568 
Protein GI89901097 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC AATTTGACGT GATCGTGATT GGTGCTGGCC CCGGCGGCTA TATCGCTGCC 
ATTCGTGCCG CCCAACTCGG CAAAAACGTG GCCTGTGTGG ATGAGTGGAA AAACAGCAAG
GGCGGCCCGG CGCTGGGCGG CACCTGCACC AACACGGGCT GTATTCCGTC CAAGGCCCTG
CTGCAGTCGT CGGAGCATTT CGACCATGCC AGCCATCACT TTGCCGAGCA CGGCATCGAG
GTCAAAGGCG TGAGCATGGA TGCGGCCAAG ATGGTGGCAC GCAAGGATGC CGTGGTGAAG
CAAAACAACG ATGGCATCCT GTACCTGTTC AAAAAGAACA AGGTCAGCTT CTTCCATGGC
CGCGCCTCGT TTGTGAAAGC AGTGGAGGGC GGCTACGAAA TCAAGGTGGC AGGCGCTGCC
GAAGAAACGC TGCTGGGCCA GCAAGTCATT GTGGCCACGG GTTCTAGCGC CCGCGCGCTG
CCGGGTGCGC CGTTCGACGA GAGCCAGGTC CTGTCCAACG AAGGCGCTTT GGCCATGACG
GCCGTGCCGA AGAAGCTGGG TTTGATTGGC TCGGGTGTGA TCGGCCTGGA GATGGGCTCG
GTCTGGCGTC GTTTGGGTTC TGAAGTGACC ATTCTGGAAG GTCTGCCGGC TTTCCTGGGC
GTGGTCGACG CGCAGATTGC CAAGGAAGCG CACAAAGCCT TTGTCAAGCA GGGTCTCAAG
ATCGAGCTGG GCGTGACGGT TGGCGACGTC AAGGTCGGCA AAAAAGGTGT CAGCGTCGCC
TGGACCAACG CCAAGGGTGA GGCTCAAAAA CTGGACGTGG ACAAGTTGAT TGTGTCAATT
GGCCGGGTGC CAAATACCGT CGGCTTGAAC GCCGAAGCCG TCGGCCTGCA ACTCGACGAG
CGCGGCGCGA TTGTGGTGGA CGGTGACTGC AAAACCAACC TGCCCGGCGT GTGGGCAGTC
GGTGACGTGG TGCGTGGCCC GATGCTGGCG CACAAGGCGG AAGAAGAAGG CGTTGCGGTG
GCCGAGCGCA TCGCGGGCCA GCATGGGCAT GTCAACTTCA ACACCATTCC GTGGGTGATT
TACACCAGCC CGGAGATTGC CTGGGTGGGA CGCACCGAGC AGCAACTCAA GGCCGACGGC
GTGGCCTACA GAGCGGGTAC CTTCCCGTTC TTGGCCAATG GCCGTGCCCG CGCTCTGGGG
GACACCACCG GCATGGTCAA AATGCTGGCC GATGCCACCA CGGATGAAAT TTTGGGCGTA
CACATTGTCG GCCCCATGGC CAGCGAGTTG ATTGCCGAAT GTGTGGTGGC GATGGAATTC
CGCGCCAGCA GCGAGGACAT TGCACGCATT TGCCACGCCC ACCCGACTTT GAGCGAGTCC
ACCAAGGAAG CGGCGCTGGC GGTGGACAAA CGCACACTGA ATTTCTAA
 
Protein sequence
MSKQFDVIVI GAGPGGYIAA IRAAQLGKNV ACVDEWKNSK GGPALGGTCT NTGCIPSKAL 
LQSSEHFDHA SHHFAEHGIE VKGVSMDAAK MVARKDAVVK QNNDGILYLF KKNKVSFFHG
RASFVKAVEG GYEIKVAGAA EETLLGQQVI VATGSSARAL PGAPFDESQV LSNEGALAMT
AVPKKLGLIG SGVIGLEMGS VWRRLGSEVT ILEGLPAFLG VVDAQIAKEA HKAFVKQGLK
IELGVTVGDV KVGKKGVSVA WTNAKGEAQK LDVDKLIVSI GRVPNTVGLN AEAVGLQLDE
RGAIVVDGDC KTNLPGVWAV GDVVRGPMLA HKAEEEGVAV AERIAGQHGH VNFNTIPWVI
YTSPEIAWVG RTEQQLKADG VAYRAGTFPF LANGRARALG DTTGMVKMLA DATTDEILGV
HIVGPMASEL IAECVVAMEF RASSEDIARI CHAHPTLSES TKEAALAVDK RTLNF