Gene Rfer_2244 details

Gene Information

• Locus tag: Rfer_2244
• Symbol: uvrC
• ID: 3962045
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 2457472
• End bp: 2459487
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637917063
• Product: excinuclease ABC subunit C
• Protein accession: YP_523497
• Protein GI: 89901026
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.208869
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTCATT TGCCTGATTC CATGTCACCT GAAGCGCCCG CAGGCCCGGC GCCCGCAACC 
CTGCCCGCGC ACCCTGCGCA GTTGCTCAGC GACGTGGCGG GTTTGCCGCC CCTGCCGGGC 
GTGTACCGCT ATTTCGACTT TGATGGCGCT GTGCTCTACG TGGGCAAGGC CATCAATTTG 
AAAAAGCGGG TGTCGAGCTA TTTTCAGAAA AATCACGGCG GCACGCGTAT CGGCCACATG 
GTGAGCAAGA TCGTGCGGCT GGAAACGACG GTGGTGCGCT CGGAGGCCGA GGCGCTGCTG 
CTGGAAAACA ACCTGATCAA GACGCTCAAC CCCAAGTACA ACATTTTGTT TCGGGATGAC 
AAGAGTTATC CGTACTTGAA GATGACAGGC GCGAGTTCTT CTTCGAATCC GGGCACCAGC 
TTTCCACGGG TGTCCTACTA CCGGGGCGCG GTGGAGAAAA AGCATCAGTA TTTCGGACCT 
TATCCGAGCG CCTGGGCGGT CAAGGAAGCG ATTTTGCTGA TGCAGAAGGT GTTTCATCTG 
CGCACCTGTG AAGACCCGGT ATTCAACAAC CGCACGCGCC CGTGTCTGCT GTACCAGATC 
AAACGTTGTT CAGCACCTTG CGTCGGCCAC ATTTCTGCCG CGGACTATGC GCAGGACGTC 
GCCAACGCCG AGCGTTTTTT GCGTGGCGAT GCGCGTCAAG TCATGGAGGC GCTGGAGGCT 
CGCATGATGG CGCATGCTGA AAAGCTGGAG TTCGAGCAGG CGGCCGAACT GCGCAATCAG 
GTGGCGGCGC TGTCCAACGT GCTGCATCAA CAGTCGGTGG ACAACGTGGC GGATCGCGAT 
GTGGACATCC TGGCGGTGAA GGTGCAGGGT GGCCGTGCGT GCGTCAATCT GGCGATGGTG 
CGCGGCGGGC GCCATCTCGG GGATCGGCCG TATTTTCCGG CGCACGTGGA AGACGCAACC 
GAGATTTACA ACGCCGGAGG TTTTGAAGAA GCGGTGGAGG ACAGCACGAC AGCGCCCCCT 
GTACCCAGTG TTGAAACCCA GGTGCTGGAA GCCTTTGTGG CACAGCATTA TCTGAACGTG 
CCCGTGCCCC CGACACTGAT TGTCAGTGCG CCGGTGAACA AACAACTGCT CGAAGCGCTC 
GCTATCCAGT CCGGCGTCAA GGTCACGGCG GTGCACCAAC CGCGCGAGCA GCGCCGTGTC 
TGGCTGGAAA TGGCGCAAAC CAATGCCGGG CTGCAGTTGG CCCGCCTGCT CTCCGAGGAA 
GGCTCGCAAC AGGCGCGCAC CCGGGCGTTG GCCGAGGCGC TGGATCTGGC GCTGGACGAT 
CTGGACGCGC TGCGGGTCGA GTGTTTTGAT ATATCCCATA CGGCAGGTGA GGCCACCCAA 
GCCTCTTGTG TGGTGTTTGC GCACCACAAA ATGCAGAACG CCGAGTACCG ACGTTACAAC 
ATCAACGACA TCACACCAGG CGACGATTAC GCGGCCATGC GCCAGGTGTT GCTGCGTCGC 
TATGGCAAGC TGGCCGAGAC CTTGCGCGAG GCGCAACAGA CCGGTCAAAT GCCTGCGGGC 
ACCGGCCGAC TGCCGGACTT GGTCCTGGTG GACGGCGGCA GAGGCCAGGT CAGCATGGCG 
CGCGAGGTAT TTGAGCAATT GGGCCTGGAC TTGTCGCTGA TCGTCGGCGT TGAGAAAGGC 
GAGGGGCGCA AGGTCGGGCT GGAAGAACTG GTGTTTGCCG ATGGCCGCGA GAAAGTCTAC 
CTGGGCAAAG ACTCGGCCGC GCTGATGCTG GTGGCGCAGA TTCGCGACGA GGCGCATCGT 
TTTGCCATTA CCGGCATGCG TGCCAAACGC GCCAAGGTGC GGGTGGATGG CGGCAAGCTC 
GAAGAAATCC CAGGCATTGG CCCCAAGCGC CGATCCAAAT TGTTGCAGCG CTTTGGTGGT 
GTGCGTGGCG TGGCGCTGGC GGGGGCGGAG GATATTGCGA CGGTGGCGGG AATCTCGCGC 
GAGTTGGCGG AAGAAATTTA CCGCGCCCTG CACTGA 

 

Protein sequence

MPHLPDSMSP EAPAGPAPAT LPAHPAQLLS DVAGLPPLPG VYRYFDFDGA VLYVGKAINL 
KKRVSSYFQK NHGGTRIGHM VSKIVRLETT VVRSEAEALL LENNLIKTLN PKYNILFRDD 
KSYPYLKMTG ASSSSNPGTS FPRVSYYRGA VEKKHQYFGP YPSAWAVKEA ILLMQKVFHL 
RTCEDPVFNN RTRPCLLYQI KRCSAPCVGH ISAADYAQDV ANAERFLRGD ARQVMEALEA 
RMMAHAEKLE FEQAAELRNQ VAALSNVLHQ QSVDNVADRD VDILAVKVQG GRACVNLAMV 
RGGRHLGDRP YFPAHVEDAT EIYNAGGFEE AVEDSTTAPP VPSVETQVLE AFVAQHYLNV 
PVPPTLIVSA PVNKQLLEAL AIQSGVKVTA VHQPREQRRV WLEMAQTNAG LQLARLLSEE 
GSQQARTRAL AEALDLALDD LDALRVECFD ISHTAGEATQ ASCVVFAHHK MQNAEYRRYN 
INDITPGDDY AAMRQVLLRR YGKLAETLRE AQQTGQMPAG TGRLPDLVLV DGGRGQVSMA 
REVFEQLGLD LSLIVGVEKG EGRKVGLEEL VFADGREKVY LGKDSAALML VAQIRDEAHR 
FAITGMRAKR AKVRVDGGKL EEIPGIGPKR RSKLLQRFGG VRGVALAGAE DIATVAGISR 
ELAEEIYRAL H