| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2212 |
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| Symbol | aceE |
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| ID | 3963159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2419826 |
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| End bp | 2422537 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637917033 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_523467 |
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| Protein GI | 89900996 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00159714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCAG TTCCCGAGAA TTTGGCCGGC GCAGCAGCGC CTGACGTCGA CAGCCAGGAA
ACCCGTGAAT GGATGGATGC GCTATCCGCC GTCATCGAGC GCGAAGGCCC TGAGCGCGCC
CATTTTTTGC TGGAGCAGTT GCTTGAGCAT GCGCGCCAAG GCAGCATCGA CATGCCGTTT
TCGGCCAACA CCGGCTATGT CAACACCCTG GAGCCGGATC AGGAAGAGCG CTGCCCCGGC
AACATCGAAA TTGAAGAACG CCTGCGCGCC TACATGCGCT GGAACGCCAT GGCGATGGTG
GTTAAAGCCA ACCGGCATCA CCCCGTGGAC GGTGGCGATC TGGGCGGGCA CATTGGCTCG
TTTGCCTCGC TGGCCCATAT GTTTGGCGCC GGTTTCAACC ATTTTTGGCA TGCCGAGAGT
GAAAACCATG GTGGTGACTG TCTCTATATC CAGGGTCACG TGGCACCCGG TGTTTATGCC
CGTGCCTACC TTGAAGGCCG TTTGACCGAA GAGCAGTTGC TCAATTTCCG CCAGGAAACC
GGTGGCAAGG GCCTGTCCAG CTACCCGCAC CCCAAGCTGA TGCCCGAGTT CTGGCAATTC
CCCACGGTGT CAATGGGCCT CGGGCCGCTG ATGGCAATTT ACCAGGCGCG CTTTCTGAAA
TACCTGCACG CCCGTGGCAT TGCCAACACC GAGAACCGCA AGGTCTGGGT GTTTTGTGGC
GATGGCGAAA TGGACGAGGT GGAGTCCCTG GGCGCTATCG GTCTGGCCGC GCGCGAAAAA
CTCGACAACC TGATTTTCGT CATCAACTGC AACCTGCAGC GCCTGGACGG CCCGGTGCGT
GGCAACGGCA AGATCATTCA GGAGTTGGAA AGCACCTTCC GCGGCGCGGG CTGGAACGTG
ATCAAGCTGC TGTGGGGCAG CAACTGGGAT CCGCTGCTGG CGCGTGACAA AGACGACGCT
TTGCGCAAGG TCATGATGGA CACGCTCGAT GGTGACTACC AGACCTTCAA GTCCAAAGAC
GGCGCCTATG TGCGCGAGCA TTTCTTTGGC CGCGACCCGC GCACGCTGGC GATGGTGGCC
AAGATGAGCG ACGACGACAT CTGGAACCTG CGCCGCGGCG GCCATGACCC GCAAAAAGTG
TATGCCGCCT ACCATTCGGC GGTCAATCAC AAGGACCAGC CGAGCGTGTT GCTGATCAAG
ACCGTCAAGG GTTTTGGCAT GGGCAAGAGC GGCGAGGGCA AGAACGCCGT GCACCAGACC
AAGAAACTGA CCGATGAAGA CATCAAGATC TTCCGTGATC GTTTCAACAT CCCGATTCCG
GACAGCGAGT TGTCCAAGCT GCCGTTCTAC AAACCGGCCG ATGACACACC CGAGATGAAG
TATCTGCACG AGCGTCGCAA GGCGCTCGGT GGTTACCTGC CGCACCGGCG CACCAAAGCC
GACGAGCATT TCACCGTGCC GGCGCTGGAA GTCTTTAAAG CCGTGCTCGA CCCGACCGCC
GAAGGCCGCG AAATCTCCAC CACGCAAGCA TACGTGCGCT TTTTGAGCCA GTTGCTGCGC
GACCAGGCGC TGGGTTCACG GGTTGTGCCG ATTCTGGTCG ACGAGGGCCG CACCTTTGGC
ATGGAAGGCT TATTCCGCCA GATTGGCATC TACAACCCGG AAGGCCAGAA ATACACCCCG
GTCGACAAAG ACCAGGTCAT GTACTACAAG GAAGATGCCA AGGGCCAGGT GCTGCAGGAG
GGTATCAACG AAGCCGGTGG CATGGCGAGC TGGATCGCGG CGGCTACCAG CTACTCCACC
TCCAACCGCA TCATGGTGCC GTTCTACGTG TACTACTCGA TGTTTGGCTT CCAGCGCATC
GGCGACCTGG CCTGGGCGGC CGGCGACATG CAGGCGCGCG GCTTTTTGCT GGGCGGCACC
TCCGGGCGCA CCACGCTCAA TGGTGAAGGC CTGCAACACG AAGATGGTCA CAGCCACATC
CTGGCCGGCA CCATTCCCAA CTGCATCAGC TACGACCCGA CCTTTGCGCA TGAGGTGGGC
GTCATCCTGC ACCACGGCTT GAAGCGCATG GTCGAGAAGC AGGACAACGT TTATTACTAC
ATCACGCTGC TCAATGAAAA CTACCCGATG CCCGGGCTGA CGGCGGGCAC TGAGGAGCAG
ATCATCAAGG GCATGTACCT GTGCAAAGCG GGCACAACGG CTGCCAAGCA GCCGACGGTG
CAGTTGCTGG GCTCTGGCAG CATCCTGCGT GAATCAATTG CCGCGCAAGA GCTGCTGGCC
AAGGACTGGG GCATCAGTGC CAATGTCTGG AGCTGCCCCA GCTTCAACGA GCTGGCGCGT
GACGGCCAAG CCTGTGAGCG CCATAACCTG TTGCATCCGG CGCAGGCGCC CAGCGTGTCG
TTTGTCGCCC AACAGCTCGA AAAACATGCC GGCCCGGTGG TGGCCGCCAC CGACTACATG
AAGGCTTATG CCGAGCAGAT TCGCTCCTTC ATCCCCAAGG GCCGCACCTT CAAAGTGCTG
GGCACCGACG GGTTTGGCCG CAGCGACTTC CGCTCCAAGT TGCGTGAGCA CTTCGAGATC
AACCGCCATT TCATCGTGGT GGCGGCGCTG AAGGCGCTGA GTGAAGAAGG CACGCTGCCG
GTGGCTAAAG TGGTTGAAGC GATTGCCAGG TACGGTATCA AGACCGACAA GGTCAATCCG
CTGTACGCGT GA
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| Protein sequence | MSAVPENLAG AAAPDVDSQE TREWMDALSA VIEREGPERA HFLLEQLLEH ARQGSIDMPF
SANTGYVNTL EPDQEERCPG NIEIEERLRA YMRWNAMAMV VKANRHHPVD GGDLGGHIGS
FASLAHMFGA GFNHFWHAES ENHGGDCLYI QGHVAPGVYA RAYLEGRLTE EQLLNFRQET
GGKGLSSYPH PKLMPEFWQF PTVSMGLGPL MAIYQARFLK YLHARGIANT ENRKVWVFCG
DGEMDEVESL GAIGLAAREK LDNLIFVINC NLQRLDGPVR GNGKIIQELE STFRGAGWNV
IKLLWGSNWD PLLARDKDDA LRKVMMDTLD GDYQTFKSKD GAYVREHFFG RDPRTLAMVA
KMSDDDIWNL RRGGHDPQKV YAAYHSAVNH KDQPSVLLIK TVKGFGMGKS GEGKNAVHQT
KKLTDEDIKI FRDRFNIPIP DSELSKLPFY KPADDTPEMK YLHERRKALG GYLPHRRTKA
DEHFTVPALE VFKAVLDPTA EGREISTTQA YVRFLSQLLR DQALGSRVVP ILVDEGRTFG
MEGLFRQIGI YNPEGQKYTP VDKDQVMYYK EDAKGQVLQE GINEAGGMAS WIAAATSYST
SNRIMVPFYV YYSMFGFQRI GDLAWAAGDM QARGFLLGGT SGRTTLNGEG LQHEDGHSHI
LAGTIPNCIS YDPTFAHEVG VILHHGLKRM VEKQDNVYYY ITLLNENYPM PGLTAGTEEQ
IIKGMYLCKA GTTAAKQPTV QLLGSGSILR ESIAAQELLA KDWGISANVW SCPSFNELAR
DGQACERHNL LHPAQAPSVS FVAQQLEKHA GPVVAATDYM KAYAEQIRSF IPKGRTFKVL
GTDGFGRSDF RSKLREHFEI NRHFIVVAAL KALSEEGTLP VAKVVEAIAR YGIKTDKVNP
LYA
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