Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2185 |
Symbol | |
ID | 3960985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2383618 |
End bp | 2384610 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637917006 |
Product | thiamine pyrophosphate enzyme-like TPP-binding |
Protein accession | YP_523440 |
Protein GI | 89900969 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.22982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACAAA CATTAGTCAA GTTTTACCAA ACCGGTACTT TTACGGTTGG TAACCGCCTG CTCGCGCCCG AGCAGCGCAG CGTACAGGCC AACACCCAGC GCAGCAACTC GCTCAATTCC GGCCACCGTG CCTGTCAGGG CTGCGGCGAA GCGCTCGGCG CGCGCTACGC CATCGACGCC GCCATGCAGG CCACCAACGG CCAGTTGATA GCTGCCAACG CCACCGGCTG CCTGGAGGTG TTCTCCACCC CGTACCCCGA AACCTCCTGG CAAATGCCCT GGATTCACTC GCTGTTTGGC AACACGGCCG CTGTGGCAAC CGGCATCGCG GCCGCCATGC GCGTGAAAGG TCGCAGTGAG GTGCGGGTCG TCGCCCAGGG CGGTGACGGT GGCACGACCG ACATCGGCTT TGGCTGTTTG TCGGGCATGT TTGAGCGTAA CGACGATGTG CTCTATATCT GTTACGACAA CGAGGCCTAC ATGAACACTG GCGTACAGCG CTCATCGGCC ACGCCACCGG CAGCGCGCAC CGCTACCACG ATGCCCGTGG GACCGCATCC AGGCAATGAA TTTGGCCAGG GAAAAAATGT GCCGCAGATT GCCATGGCGC ATGAAATCCC CTATGTAGCC ACCGCGACGG TGGCCGACCT GCGGGATCTG GAATACAAGG TCAAGAAAGC CATGTCGATT CACGGCGCGC GTTACATCCA CATCTTTGTC CCCTGCCCGC TCGGTTGGGG CGCCGCCTCA CACGACACCA TTCGGCTCGC ACGGCTGGCC GTTGAGAGCG GTGTATTTCC GGTCTTTGAA GCCGAACGCG GCGAGGTGAC CGGCGTGGCG AAAATCCGGC GCCGGGTGCC GATTGAGGAT TACCTGAAAC CACAAAAGCG TTTTGCTCAC CTGTTTGGCA AAACCCCTGA CCTTGAAACC ATTGCACGGC TGCAAGCCAG GGCCGACCGC AACATCCGCC GCTTTGGCCT GCTGGATTCT TAA
|
Protein sequence | MEQTLVKFYQ TGTFTVGNRL LAPEQRSVQA NTQRSNSLNS GHRACQGCGE ALGARYAIDA AMQATNGQLI AANATGCLEV FSTPYPETSW QMPWIHSLFG NTAAVATGIA AAMRVKGRSE VRVVAQGGDG GTTDIGFGCL SGMFERNDDV LYICYDNEAY MNTGVQRSSA TPPAARTATT MPVGPHPGNE FGQGKNVPQI AMAHEIPYVA TATVADLRDL EYKVKKAMSI HGARYIHIFV PCPLGWGAAS HDTIRLARLA VESGVFPVFE AERGEVTGVA KIRRRVPIED YLKPQKRFAH LFGKTPDLET IARLQARADR NIRRFGLLDS
|
| |