Gene Rfer_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2185 
Symbol 
ID3960985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2383618 
End bp2384610 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content61% 
IMG OID637917006 
Productthiamine pyrophosphate enzyme-like TPP-binding 
Protein accessionYP_523440 
Protein GI89900969 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.22982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA CATTAGTCAA GTTTTACCAA ACCGGTACTT TTACGGTTGG TAACCGCCTG 
CTCGCGCCCG AGCAGCGCAG CGTACAGGCC AACACCCAGC GCAGCAACTC GCTCAATTCC
GGCCACCGTG CCTGTCAGGG CTGCGGCGAA GCGCTCGGCG CGCGCTACGC CATCGACGCC
GCCATGCAGG CCACCAACGG CCAGTTGATA GCTGCCAACG CCACCGGCTG CCTGGAGGTG
TTCTCCACCC CGTACCCCGA AACCTCCTGG CAAATGCCCT GGATTCACTC GCTGTTTGGC
AACACGGCCG CTGTGGCAAC CGGCATCGCG GCCGCCATGC GCGTGAAAGG TCGCAGTGAG
GTGCGGGTCG TCGCCCAGGG CGGTGACGGT GGCACGACCG ACATCGGCTT TGGCTGTTTG
TCGGGCATGT TTGAGCGTAA CGACGATGTG CTCTATATCT GTTACGACAA CGAGGCCTAC
ATGAACACTG GCGTACAGCG CTCATCGGCC ACGCCACCGG CAGCGCGCAC CGCTACCACG
ATGCCCGTGG GACCGCATCC AGGCAATGAA TTTGGCCAGG GAAAAAATGT GCCGCAGATT
GCCATGGCGC ATGAAATCCC CTATGTAGCC ACCGCGACGG TGGCCGACCT GCGGGATCTG
GAATACAAGG TCAAGAAAGC CATGTCGATT CACGGCGCGC GTTACATCCA CATCTTTGTC
CCCTGCCCGC TCGGTTGGGG CGCCGCCTCA CACGACACCA TTCGGCTCGC ACGGCTGGCC
GTTGAGAGCG GTGTATTTCC GGTCTTTGAA GCCGAACGCG GCGAGGTGAC CGGCGTGGCG
AAAATCCGGC GCCGGGTGCC GATTGAGGAT TACCTGAAAC CACAAAAGCG TTTTGCTCAC
CTGTTTGGCA AAACCCCTGA CCTTGAAACC ATTGCACGGC TGCAAGCCAG GGCCGACCGC
AACATCCGCC GCTTTGGCCT GCTGGATTCT TAA
 
Protein sequence
MEQTLVKFYQ TGTFTVGNRL LAPEQRSVQA NTQRSNSLNS GHRACQGCGE ALGARYAIDA 
AMQATNGQLI AANATGCLEV FSTPYPETSW QMPWIHSLFG NTAAVATGIA AAMRVKGRSE
VRVVAQGGDG GTTDIGFGCL SGMFERNDDV LYICYDNEAY MNTGVQRSSA TPPAARTATT
MPVGPHPGNE FGQGKNVPQI AMAHEIPYVA TATVADLRDL EYKVKKAMSI HGARYIHIFV
PCPLGWGAAS HDTIRLARLA VESGVFPVFE AERGEVTGVA KIRRRVPIED YLKPQKRFAH
LFGKTPDLET IARLQARADR NIRRFGLLDS