| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2177 |
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| Symbol | |
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| ID | 3961306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2376181 |
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| End bp | 2377473 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637916997 |
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| Product | cysteine desulfurase IscS |
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| Protein accession | YP_523432 |
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| Protein GI | 89900961 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00159504 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATTC GAAAGTGTAA AACTGGCCGG TCGATAATTC AGCCTTTTCA AAATAGCAGT
AACGAGCCCG CCATGGATAC CACACCGCAT TTCCCGATTT ATATGGACTA CAGCGCGACC
AACCCTTGCG ATCAGCGGGT GGTGGATGCC ATGATTCCCT GGTTGCGCCA GCACTTTGGC
AACCCCGCAT CCCGCAGCCA CGCTTGGGGC TGGGAAGCCG AAGCCGCCGT GGAAAAAGCG
CGTCAACAAG TTGCAGACCT GGTGGGAGCC GATCCACGCG AAATCGTCTG GACCTCCGGC
GCCACCGAGT CCGACAACCT GGCCTTGAAG GGCGCTGCCC ATTTCTACCA GACCAAGGGC
AAACACATCA TTACCGTCAA GACCGAACAC AAAGCGGTGC TTGATACCTG TCGCGAATTG
GAGCGACAAG GCTTTGCGGT CACGTATCTG GATGTGCAGG AAGATGGTTT GATTAATCTT
GACGCATTCA AGGCCGCCAT TCGTCCTGAC ACCATTTTGG CAAGTGTCAT GTTCGTGAAT
AACGAGATTG GTGTTATCCA GGATATTGCC GCCATTGGTG CGCTTTGCCG CGAAAAAGGC
ATTATTTTTC ACGTTGATGC GGCGCAGGCG ACTGGTCGGG TCGAGTTTGA CCTGACCCAG
TTGCCGGTCG ATCTGATGAG CCTGACTGCG CATAAAACCT ACGGTCCCAA AGGCATCGGT
GCCCTGTTTG TGCGGCGCAA ACCGCGCATC CGCATTGAGG CGCAAATGCA TGGTGGCGGG
CATGAGCGCG GGATGCGCTC CGGCACCTTG CCGACGCACC AGATTGTTGG CATGGGTGAG
GCCTACCGCA TTGCCAAAGA AGAGATGGCG GGTGAAAACA TCCGCATTCA GGCGCTGCAC
GACCGCATGC TGGCGGGTTT GAAAGATGTC GAACAGGTGT TTATCAACGG CCATCTTGAA
AAACGTGTGC CGCACAACCT GAACATGAGC TTCAACTATG TCGAAGGCGA GTCTTTGATG
ATGGGCATCA AGGGCTTGGC CGTCTCCAGC GGTTCTGCCT GTACGTCGGC GAGTCTGGAA
CCCAGCTATG TGTTGCGCGC CTTGGGGCGC AGTGACGAGC TGGCACACAG CAGCCTGCGC
ATGACGATTG GCCGATGGAC GACTGAAGAA GAGATTGATT ACGCGGTTGA GACCATCAAA
GTCAACGTGG CCAAGCTGCG TGAATTAAGT CCGCTCTGGG ATATGTACAA AGAGGGTATC
GATATATCCA CGATTCAGTG GGCAGCCCAT TAA
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| Protein sequence | MRIRKCKTGR SIIQPFQNSS NEPAMDTTPH FPIYMDYSAT NPCDQRVVDA MIPWLRQHFG
NPASRSHAWG WEAEAAVEKA RQQVADLVGA DPREIVWTSG ATESDNLALK GAAHFYQTKG
KHIITVKTEH KAVLDTCREL ERQGFAVTYL DVQEDGLINL DAFKAAIRPD TILASVMFVN
NEIGVIQDIA AIGALCREKG IIFHVDAAQA TGRVEFDLTQ LPVDLMSLTA HKTYGPKGIG
ALFVRRKPRI RIEAQMHGGG HERGMRSGTL PTHQIVGMGE AYRIAKEEMA GENIRIQALH
DRMLAGLKDV EQVFINGHLE KRVPHNLNMS FNYVEGESLM MGIKGLAVSS GSACTSASLE
PSYVLRALGR SDELAHSSLR MTIGRWTTEE EIDYAVETIK VNVAKLRELS PLWDMYKEGI
DISTIQWAAH
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