Gene Rfer_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2176 
Symbol 
ID3961305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2375664 
End bp2376200 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content54% 
IMG OID637916996 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_523431 
Protein GI89900960 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000532163 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTCA CCACCAAAGG CCGTTTTGCG GTCACTGCCA TGATTGATTT GGGTCTGCGT 
CAGAGCAACG GGCCGGTCAC TTTGGCGGCC ATAAGTCAGC GCCAGCAGAT TTCGCTGTCA
TATCTGGAGC AGTTGTTTGG CAAACTGCGA CGCCATGAGC TGGTGGAGTC CACCCGCGGC
CCCGGAGGGG GCTATACCTT GGCGCGCAAT CCAGCCGAGA TCACGGTGGC AGAAATCATC
ACGTCTGTGG ATGAACCGAT TGATGCCACC CACTGCGCAG GCAAAGAGAA CTGCTTGGGT
GAGGGTGCAC GTTGCATGAC CCACGACCTC TGGACGTCAT TGAATACAAA AATGGTGGAG
TTTTTGGACT CTGTGACACT GCAAAAACTG GTGGACGACC AATTGGCCAA AGGGCTTCAA
ATTGAAGACA AGCCGACGGT CAAGCGTGCC ATTTCCAGTA TGCCGACGAT CAAGCCGATT
CGCATGAACA TACCGAATTC AGTGTTTGCG CTGGGCAATG CGTATTCGAA AGTGTAA
 
Protein sequence
MRLTTKGRFA VTAMIDLGLR QSNGPVTLAA ISQRQQISLS YLEQLFGKLR RHELVESTRG 
PGGGYTLARN PAEITVAEII TSVDEPIDAT HCAGKENCLG EGARCMTHDL WTSLNTKMVE
FLDSVTLQKL VDDQLAKGLQ IEDKPTVKRA ISSMPTIKPI RMNIPNSVFA LGNAYSKV