| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2144 |
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| Symbol | |
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| ID | 3961195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2325773 |
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| End bp | 2326756 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916964 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_523399 |
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| Protein GI | 89900928 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.126393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACCCA AAATATTGAT TGCTCGGGCT ATCTTCCCAG AAGTTGTTGC CAAGCTGGCG
CAGCACTTTG AGGTCACGTC CAACCAAGCC GATGAGCTCT GGACATCGGC TCAGTTGATT
GAGCGACTGA AAGGCAAACA GGGCGTGTTC ACCACCGGTG GCGAGCGCAT TGACGCTGCG
TTGCTGGCCG CCTGCCCTGA GTTGAAAATC TGCGCCAACA TGGCCGTGGG TTACAACAAC
TTCGACATAG CGGCCATGAC GGCAGCCAGA GTGTTGGGCA CCAACGCACC GGATGTGCTG
ACCGAGACCA CTGCCGACTT CGGCTTTGCC CTATTGATGG CGACGGCGCG TCGCATGGCC
GAAGCGGAGC ATTTTTTGCG CGCCGGCCAG TGGACACGCT GGCGCTACGA CATGTTTGCC
GGCGCCGATA TTCATGGCAG CACGCTCGGG ATTCTGGGTA TGGGCCGCAT CGGCCAGGGC
ATCGCCAAAC GCGGCGCCCA TGGCTTTGGC ATGCAGGTGA TTTACCACAA TCGATCGCGG
CTGGATGCCG CAACCGAGCT TGAATGCAAG GCAATTTACG TCAGCAAACA GGAGTTGCTG
AAAACCGCAG ACCATCTGGT GCTGGTGCTG CCGTATTCGG CGTCTTCACA CCACGCCATC
GGTGCGGCCG AGCTGGCGCA AATGAAGCCC ACTGCCACGC TGGTCAACAT CGCGCGCGGT
GGCATTGTGG ACGATGCCGC GCTGGCGCTG GCCTTGCGCA ACAAGACGAT AGCCGCCGCC
GGTCTCGATG TGTTTGAAGG CGAGCCCGCC GTGCACCCTG ATTTGCTGAC TGTGCCCAAT
GTGGTGCTGA CCCCGCACAT CGCCAGCGCC ACCATGCCCA CGCGGCTGGC CATGGCCAAT
CTGGCGGCTG ACAACCTGAT TGGATTTTTG ACGCAGGGCA AACCCGTGAC GCCGCTGAAC
CCCGCGGTGC TGGTGACGCC ATAA
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| Protein sequence | MKPKILIARA IFPEVVAKLA QHFEVTSNQA DELWTSAQLI ERLKGKQGVF TTGGERIDAA
LLAACPELKI CANMAVGYNN FDIAAMTAAR VLGTNAPDVL TETTADFGFA LLMATARRMA
EAEHFLRAGQ WTRWRYDMFA GADIHGSTLG ILGMGRIGQG IAKRGAHGFG MQVIYHNRSR
LDAATELECK AIYVSKQELL KTADHLVLVL PYSASSHHAI GAAELAQMKP TATLVNIARG
GIVDDAALAL ALRNKTIAAA GLDVFEGEPA VHPDLLTVPN VVLTPHIASA TMPTRLAMAN
LAADNLIGFL TQGKPVTPLN PAVLVTP
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