| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2112 |
|---|
| Symbol | |
|---|
| ID | 3962464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2289028 |
|---|
| End bp | 2289981 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637916931 |
|---|
| Product | transcriptional regulator CysB-like protein |
|---|
| Protein accession | YP_523367 |
|---|
| Protein GI | 89900896 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAC ACCAATTCCG CTTTGTGCAA GAGGCTGTCC GGCGCAACCT CAATCTGACC
GAAGCGGCCA AGGCGCTGCA CACGTCCCAG CCAGGCGTCT CCAAAGCCAT CATTGAGTTG
GAAGAAGAGC TGGGTATTGA AATTTTTGCC CGTCACGGCA AACGCCTCAA GCGAGTGACC
GAGCCGGGTC AGCATGTTCT CAAAAGCATT GAGCTCATCA TGCGGGAGGT GAGCAATCTC
AAACGCATCG GTGAGCAATA CAGTGCCGAA GACAGCGGCA CCCTGTCGAT CGCCACCACC
CACACGCAGG CGCGCTATGT GCTGCCGGAA CCCGTGGCCA AGCTGCGCCA AGCCTACCCC
AAGGTCAATG TCAGCCTGCA TCAGGGCTCG CCGGACCAGG TGGCGAGAAT GTTGATTGAT
GAAGTGGCCG AGATCGGCAT TGCCACTGAA TCGTTGGATA GCTATTCCGA GCTGGTGACC
TTACCCTGCT ACGAGTGGCA GCATGTGCTC GTATTTCCGG TGGGCCACCC CTTGTGTCTG
AAGGAGCACC TGACCCTGGA AGATATTGCC CACGAACCCC TGATCACCTA CCACCCGTCT
TACACCGGGC GCACCAAGAT TGACCACGCC TTTGCCACCC GCAAGTTGGA GCCCCGCATT
GCACTGGAGG CGATTGACTC GGACGTGATC AAGACCTATG TGCGCCTGGG CCTGGGCATC
GGCATTGCCG CGGAAATGTC GGTGCGTGAC GTGGTGGCCG AGGGCGCCCA AAGCGATCTG
GTCGTGCGCC CCGCCGGGCT TTTGTTTGGC CAGAATGTGG CGCGCGTCGC CTTCAAACGT
GGCGCCTACC TGCGCAATTT TGTTTACAAA TTTGCCGAAT TGCTGAGCGA CCGGCTGAGC
CGTGATCTGG TGGCACGTGC CATGCTGGGT CATGTTGATG ACTACGAACT GTAA
|
|---|
| Protein sequence | MNLHQFRFVQ EAVRRNLNLT EAAKALHTSQ PGVSKAIIEL EEELGIEIFA RHGKRLKRVT
EPGQHVLKSI ELIMREVSNL KRIGEQYSAE DSGTLSIATT HTQARYVLPE PVAKLRQAYP
KVNVSLHQGS PDQVARMLID EVAEIGIATE SLDSYSELVT LPCYEWQHVL VFPVGHPLCL
KEHLTLEDIA HEPLITYHPS YTGRTKIDHA FATRKLEPRI ALEAIDSDVI KTYVRLGLGI
GIAAEMSVRD VVAEGAQSDL VVRPAGLLFG QNVARVAFKR GAYLRNFVYK FAELLSDRLS
RDLVARAMLG HVDDYEL
|
|---|
| |