| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2107 |
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| Symbol | |
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| ID | 3962459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2283200 |
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| End bp | 2284585 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916926 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_523362 |
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| Protein GI | 89900891 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0608619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAA AAACTTCCAC TGCCGGGCCC AAGCTGGGCT TGGCGCGGGC CGGCTTCAGC
TCCGGCTTTG GCGTGCTGGC GGCCACCCTG GGCTCGGCAG TCGGTTTGGG CAATATCTGG
AAATTTCCGT ACCTGACCGG CGCCAACGGG GGGGCTGGTT TCCTGCTGGT TTACGTGCTG
GCCACGCTGC TGGTCGGGCT GCCGGTGATG ATGGCCGAGA TTTCGCTCGG GCGCGCGGCC
AAGGCCAACC CCATTTCCAC CCTGCAAGCC TTGGCGCCCA AGCGCCAGCC TTGGTGGCTG
ATTGGCGTGG CGGGCATGCT GGCCGCTTTT TTGATTCTGT CTTTCTATTC CGAAGTGGTG
GCCTGGGTTT TCGCCTATGT GTTCAAGGCG ATGCGCGGCT CCATTCTCAG CAGCGATCCG
CAGGTGACCG AGGCCGCCTT CAACGCGCTG ATCAGCGACC CGCTGCAGTC GCTCTTGTGG
CAGTGGGGTG TGCTGGTGTT TATTGGTGGC ATCCTGCTGT TGGGCGTGAC CAAGGGCATC
GAGGCCATGA CCAAGAAGCT GATGCCCATC TTGTTTCTGC TGCTGTTGCT GCTGTGCGCG
GTCAGTCTGT CGCTGGACAA GGCACTGCAA GGGCTGGCCT TTCTGTTTCA ACCAGATTTC
AGCAAGATCA CCGCGTCGGT GGTGCTGACG GCCATGGGAT TGGCATTTTT CAAGCTGTCG
ATCGGCATGG GGACCATGAT GACCTACGGC AGCTATTTCC GGGACGATCA GAACATCCCA
CTCACCACGG TGCGCGTCAT GAGCGCCGAT TTGTGCATCT CGATGCTGGC GGGTATCGCC
ATTTTTCCGG CGGTATTTAC CTTCGGCTTT GCGCCCGCCG CCGGACCAGC GCTGGTCTTT
ATCACGATTC CGGCCGTGTT TTCCCAGATC CCGATGGGAC AGTGGCTGAT GGTGGTCTTC
TTCGTGCTGG CGGCCATCGC CGCCACCGGC GCGATGCTGT CGCTGATGGA AGTGCCGGTG
GTCATCTTGC ACGAGCGTTT GGGCCTGTCG CGCCCGAAGG CCACGCTCTT GACCATTGGC
TTGCTGGTTG TGCTGGGCGC CAGCTGCGCG CTGAGCAACA GCGCGTTGGC TGACTTCAAG
CTGTTCGGGA TGAGCATGTT TGATTTATTC GACTTCGTCT CGTCCAACAT CATCCTGCCC
GCCGGGGGAA TTTTTATTGC GCTGTTTGTC GGCTGGGTGT GGGGTGTTGA CAAGTTCAGC
CGCTCACTGA CCAACCACGG TCAACTGCAC AACCAAAAGT TGGCACAGGC GGTGTTTTTC
TTGCTGCGCT ATGTCTCGCC CGCGTTGATC CTGGTCGTGA TGCTCAAGGG CTTGAAGTTC
TTCTGA
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| Protein sequence | MNEKTSTAGP KLGLARAGFS SGFGVLAATL GSAVGLGNIW KFPYLTGANG GAGFLLVYVL
ATLLVGLPVM MAEISLGRAA KANPISTLQA LAPKRQPWWL IGVAGMLAAF LILSFYSEVV
AWVFAYVFKA MRGSILSSDP QVTEAAFNAL ISDPLQSLLW QWGVLVFIGG ILLLGVTKGI
EAMTKKLMPI LFLLLLLLCA VSLSLDKALQ GLAFLFQPDF SKITASVVLT AMGLAFFKLS
IGMGTMMTYG SYFRDDQNIP LTTVRVMSAD LCISMLAGIA IFPAVFTFGF APAAGPALVF
ITIPAVFSQI PMGQWLMVVF FVLAAIAATG AMLSLMEVPV VILHERLGLS RPKATLLTIG
LLVVLGASCA LSNSALADFK LFGMSMFDLF DFVSSNIILP AGGIFIALFV GWVWGVDKFS
RSLTNHGQLH NQKLAQAVFF LLRYVSPALI LVVMLKGLKF F
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