| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2059 |
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| Symbol | |
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| ID | 3962106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2229045 |
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| End bp | 2229821 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916879 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_523315 |
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| Protein GI | 89900844 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0352298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGGGAGA GGGGGGGGGG AATACAAAGC ATCAAAAATC AACTCCCACC CGAGTCAAAG
GACAAGGTTC TGACAATAAG ACCCAAAGAT CAACCTGCCT ATACTCTTTC CCCTATGACC
TCCATCGCCC ACCTCCGCAA AAGCTACGAA CGCGCCGAAC TCAGCGAAGA CGCCTCACAC
GCTGACCCGC TCCAGCAGTT TGAGAAATGG TTGAAAGAAG CCATTTCCGC TGAAATCCCC
GAGCCCAACG CCATGACCGT GGCCACCGTA GCGAGTAACC TGCGCCCCAG CACCCGCGTG
GTGCTGATCA AGGGCTATGA CGAGCGCGGC ATCACCTGGT TCACCAACTA TGACAGCCGC
AAGGGCCAGG AGCTGGCGGG CAACCCTTAT GCCGCGCTGC AGTTTCACTG GGTGGAGCTG
GAACGGGTGG TGCGCATCGA AGGCATTGTT GAAAAAGTGA GTGAGGAAGA AAGCGACAGC
TACTTTCACA GCCGACCGCT GGACTCGCGC ATCGGCGCCT GGGCCAGCCC GCAAAGCCAG
GTGATCTCGG GGCGGAGCGT GCTGGTGGCC AACGCGGCCA AATACGGGGC AAAATTTTTG
CTCAACCCGC CGCGCCCGCC GCACTGGGGC GGCTACCGCC TCAAGCCCGA CCATTGGCAA
TTCTGGCAAG GCCGCAAGAG CCGCCTGCAT GACCGGCTGC GCTACACCTT GATCGAACCT
GCCAGCACCT TGCCCGATGC CAAACCGGTG TGGATTCGCG AACGTCTGGC GCCCTGA
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| Protein sequence | MGERGGGIQS IKNQLPPESK DKVLTIRPKD QPAYTLSPMT SIAHLRKSYE RAELSEDASH
ADPLQQFEKW LKEAISAEIP EPNAMTVATV ASNLRPSTRV VLIKGYDERG ITWFTNYDSR
KGQELAGNPY AALQFHWVEL ERVVRIEGIV EKVSEEESDS YFHSRPLDSR IGAWASPQSQ
VISGRSVLVA NAAKYGAKFL LNPPRPPHWG GYRLKPDHWQ FWQGRKSRLH DRLRYTLIEP
ASTLPDAKPV WIRERLAP
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