Gene Rfer_2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2033 
SymboldinG 
ID3963171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2195024 
End bp2197174 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content65% 
IMG OID637916853 
ProductATP-dependent DNA helicase DinG 
Protein accessionYP_523289 
Protein GI89900818 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTACCG ACGATCTGGC GGGCCTGTCG CTGGCCGCTT TTGACCAGAT GGTGGACGCC 
ACGGCGGGTT TTCGCTCCCG CCCCGGCCAG CGTGACATGG CGCAGCAGAT TGCCAGTGCC
TTGTCGGGCG TGACGCTGGG CGAGCATGCC GAGCCCAACA AGTCTATTGC GGTCATTCAG
GCCGGCACCG GCGTGGGCAA GTCGGCGGCT TACCTGGCCA CTACCGTGGC GCTGGCGCTG
GCGCGCAAAA CCCGGGTCGT CATTTCAACC GCCACGGTGG CGCTGCAAGA GCAACTGATG
ACCAAGGACT TGCCCGCGCT GGCCGCGGTG CTGGAAAGCC CTTTTGTCTT TGCGCTGGCC
AAGGGGCGTG GCCGCTACGT GTGCAAGTTC AAGCTGGAGC GCCTGGCCGG TCCGGGCGGC
GATGAACTGA ACGAGGAGCT GTTTGGCGTG GATGAAGACA CGCCACCCAC GCGCGCAGCG
TTTGCCGCCC AGCTGCAGGG TGTTGACCCT GAAGAGCGGC GCATGAAGCT CTATGACGCG
CTGGCCACTG CCTTGAGCCA AGGCAAATGG GACGGCGACC GCGACAAGCT CGCCGAGCAG
CCCGACGCGC GCGACTGGTC GGCGGTGGCG GCGGAGCGCC ACAGCTGCAC CGCGCGGCAC
TGCCCGCGTT TTCGCGACTG CAGCTACTAC CAGGCGCGCA CGCAACTGGC CGAAGCGAAT
GTCATCGTTG CCAACCATGA CCTGGTGCTG GCCTCGCTCG GCATGAATGC GCTGCCCGAG
CTGGAAAAAT GCCTGGTGGT GTTTGACGAA GGGCACCACC TGCCCGCCGT CGCGCTGGAC
CAGTTTTCCA GCAGCATGGA CCTATCAAGC CTGCGCTGGC TCGACAAACT GCCCAAAATC
TTGCTGGAGG TGAGCGAGAA GATCAGTCGG ACGCCTGATC AGGACGTCAA CACCCTGGCC
CAGCAGCTCA AGACCGCCTT GCTCGATGTC AGCCGCATCG CCATGGATTT GTTGCGGACC
GGCGGCACTG GCTACGACGG CACCCAGCGC TTCAAGAACG GCGTGCTGCC GGTTGTCTTG
CTGGAGCCGA TGACGCTGAT TCAGGGCCAC GCCAGGGGCT TGTCCGGCGT GCTCGAAGCC
CTGGGCGCCG AGCTGAAACG GCGCGCCAAG GAAGACCCGG CGCTGGCCTT GAGCAGCTCC
CTGCTGTACG CCAAGCTCGG TCCGATGGCG CCCAGGCTGG GCAGTGTGCT GGCCACCAGC
GGCATGCTGC TGCAACAGGG GCCGCAACCG CTGGCCAAGT GGCTCAAGTC CGACACCAGC
TCGGGCCTGG TTTTTATGAG TGCCCACGCC TGCCCGATTG TGCCGGGCGA GCTGTTGCAG
CAAAGCCTGT GGCGCCAGGT GCGCGGCGCC GTCATCACCT CGGCGACGCT GACGAGTTGC
GGCAGTTTTG ATTTTTTTCT GCAGGAAGCC GGGCTCGACA ACGACGAGAC GGTGTCCACG
CTGGAGGTCG CCAGCCCTTT TAATTACACC GCCCAAGGTC GCTTGATCGT GGTCGAGACC
GTGGCTGACC CGAAGAACGT CGAGGCCTAC ACACGCGAGC TGGTGGCGGA GTTGCTGCTC
GATCTGAGCC AAATCGAACA TGGCGCGCTG GCCCTGTTCA CCTCGCGCGT GCAGATGAAA
GCGGCGGTCG ACGCCCTGAG CCCCACGCTG CAGGACGTGG TGCTGGTGCA GGGGCAAATG
GCGCGCACCC GGCTGCTGGC CACGCATCAG GCGCGGGTGG AGGCGGGGCG GCCTTCCGTC
ATTTTTGGCC TGCAGTCGTT TGGCGAAGGG CTGGACTTGC CCGGGCGGCT GTGCGAAACC
GTGTTGATTG CTAAATTGCC CTTCAGTCCA CCGTCGGACC CGGTGGAAGA AGCGCGCTCC
GAGTGGCTCA AAAGTGTCGG GCGCGACCCG TTTTCCGAAC TGGTGGTGCC TGCCACCGGT
ATCCGGCTGC TGCAGTGGAC GGGGCGGGCG ATTCGCACCG AAGAAGATGT GGCGACCGTC
ATCTGTTATG ACCGGCGCCT GCTCACCATG GCGTTTGGGC GGCGCATGCT GCAGGGCTTG
CCCGCCTACG CGGTGCTGCG CCGCTCGGCG GGTGTGCTGC GGGCGATGTA G
 
Protein sequence
MSTDDLAGLS LAAFDQMVDA TAGFRSRPGQ RDMAQQIASA LSGVTLGEHA EPNKSIAVIQ 
AGTGVGKSAA YLATTVALAL ARKTRVVIST ATVALQEQLM TKDLPALAAV LESPFVFALA
KGRGRYVCKF KLERLAGPGG DELNEELFGV DEDTPPTRAA FAAQLQGVDP EERRMKLYDA
LATALSQGKW DGDRDKLAEQ PDARDWSAVA AERHSCTARH CPRFRDCSYY QARTQLAEAN
VIVANHDLVL ASLGMNALPE LEKCLVVFDE GHHLPAVALD QFSSSMDLSS LRWLDKLPKI
LLEVSEKISR TPDQDVNTLA QQLKTALLDV SRIAMDLLRT GGTGYDGTQR FKNGVLPVVL
LEPMTLIQGH ARGLSGVLEA LGAELKRRAK EDPALALSSS LLYAKLGPMA PRLGSVLATS
GMLLQQGPQP LAKWLKSDTS SGLVFMSAHA CPIVPGELLQ QSLWRQVRGA VITSATLTSC
GSFDFFLQEA GLDNDETVST LEVASPFNYT AQGRLIVVET VADPKNVEAY TRELVAELLL
DLSQIEHGAL ALFTSRVQMK AAVDALSPTL QDVVLVQGQM ARTRLLATHQ ARVEAGRPSV
IFGLQSFGEG LDLPGRLCET VLIAKLPFSP PSDPVEEARS EWLKSVGRDP FSELVVPATG
IRLLQWTGRA IRTEEDVATV ICYDRRLLTM AFGRRMLQGL PAYAVLRRSA GVLRAM