Gene Rfer_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2022 
Symbol 
ID3961770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2181464 
End bp2181937 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content62% 
IMG OID637916842 
ProductAsnC family transcriptional regulator 
Protein accessionYP_523278 
Protein GI89900807 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGG ATCGCTACGA CCAACACATA CTTGAAGTGC TGCAGCAAGA CGGGCGCATC 
AATAACCAGG ACCTGGCCGA CCGCATCGGC CTGTCCCCCT CACCCTGCCT GCGCCGGGTG
CGTGCGCTGG AGGAATCCGG CCTGATCGTG GGCTACCGGG CGGTGCTGGA CGCCAAAAAA
CTGGGCCTGA CGCTGCTGGC GCTGATCAAC GTCTCCATGG ACCTGCACAC GCCCGAGCGC
TTTGCCAATT TTGAGGCGAC CGTGTGCGCA TTGCCGGAGG TGCTGGACTG CCTGCTGATC
ACCGGGCAGG ATGCCGACTA CCAGCTCAAG GTGGCCGTGC GCGACATGGA TCACTACCAA
TCTTTGCTGC TTGACCAGCT CACCCGCATT GAGGGCGTGA CCGGTGTGCA CTCCAGCTTC
GTGCTGCGCA AAGTGGTGAG TAAAACGGAG CTGGCAGTGG CGCCACCACG ATAG
 
Protein sequence
MKLDRYDQHI LEVLQQDGRI NNQDLADRIG LSPSPCLRRV RALEESGLIV GYRAVLDAKK 
LGLTLLALIN VSMDLHTPER FANFEATVCA LPEVLDCLLI TGQDADYQLK VAVRDMDHYQ
SLLLDQLTRI EGVTGVHSSF VLRKVVSKTE LAVAPPR