Gene Rfer_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2021 
Symbol 
ID3961769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2180540 
End bp2181301 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content61% 
IMG OID637916841 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_523277 
Protein GI89900806 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGA TCGCTCCCAG GGTTCGTGCC AGTTGGAAGC TGGCATGTGT GCTGCTGCAT 
CTGGTGCGCG GCTGGTGGAC GGTGGTCCTG GTGTTTCCAG GACTGACGAC TCCCCAAAAG
CAAGAACGAA TCAGGGCTTG GGCCCTCGCC CTTCTTGCGC TGCTAGCTAT TAAATTGGTA
GTAGTTGGCA GACCGCCAAA GCGTGGCCCC TTGTTGCTGG TGTGTAACCA CATCTCGTGG
CTCGATATTT ATGTGATTTA TGCGGTCTGC CATTGCCGCT TTGTCGCCAA AGCCGATGTT
GGGCGCTGGC CCCTGATCGG AACTCTGGCT GCGGCTGTCG GCACCTTGTT CATCGAGCGC
GAGTCCCGGC GTGACGCTTT GCGTGTGGTG CAGCAGATGG CAGATAGCCT GCATGCCGGT
GACTCGATCG TGGTGTTTCC AGAAGGCACC AGCAGTGACG GCGTTGGTGT GCTGCCATTT
CATGCCAACC TAGTGCAAGC CGCCATTGCT GCCAATGCGC CGGTGCAACC CGTGGCGCTG
CGGTTTTCGG ATGCCGCCAG TGCCGCGCAC AGCCTGGCGC CGTGCTACAT CAATAACGAC
ACGCTAATGG GCTCCATGTG GCGCATGCTG ACCGCGCCGC CGCTGTGCGC GACCTTGATC
TTTGGCGAGC AGCAATCAGC CCAAGAGCGT GGACGGCGTG CGTGGAGCGC CGACCTGCGC
CTGGCGGTAG AAGCCCTGCG GGCAAGCCCC ATAGACAGTT GA
 
Protein sequence
MKPIAPRVRA SWKLACVLLH LVRGWWTVVL VFPGLTTPQK QERIRAWALA LLALLAIKLV 
VVGRPPKRGP LLLVCNHISW LDIYVIYAVC HCRFVAKADV GRWPLIGTLA AAVGTLFIER
ESRRDALRVV QQMADSLHAG DSIVVFPEGT SSDGVGVLPF HANLVQAAIA ANAPVQPVAL
RFSDAASAAH SLAPCYINND TLMGSMWRML TAPPLCATLI FGEQQSAQER GRRAWSADLR
LAVEALRASP IDS