| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2011 |
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| Symbol | |
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| ID | 3961759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2167362 |
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| End bp | 2169281 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637916831 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_523267 |
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| Protein GI | 89900796 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATAATC AGTGGTTTTC AAAAATTGCC GTCTGGCTCG TTATTGCTCT TGTGCTTTTC
ACGGTATTCA AGCAGTTTGA TGCGCGTGGG CCTGCGAGCG CCGGGTATCT GGGCTACTCT
GACTTTCTGG AGGAAGTTCG AAATAATCGC ATCAAGAGCG CTGTCATCCA GGAGGGGCAG
GGCGGTACTG AAATTGTGGC TGTGACGACC GATGACCGCA GGGTCAGGAC CACCGCGACA
TACCTGGACC GTGGTCTGGT GGGTGACTTG ATCGCCAATG ATGTCAAGTT TGATGTCAAA
CCGCGCGAAG AAGGTTCTTT GCTCATGACG CTGCTGGTCA GTTGGGGGCC GATGCTCTTG
TTGATCGGTG TCTGGGTTTA CTTTATGCGC CAGATGCAGG GCGGCGGCAA GGGTGGGGCC
TTCAGTTTTG GTAAATCCAA GGCACGTCTG CTTGACGAAA ACACCAACTT GGTGACCTTC
GCTGATGTTG CGGGTTGTGA CGAGGCCAAG GAAGAAGTCA AGGAAGTGGT TGACTTTCTG
AAAGATCCGG CCAAATTCCA GAAGCTGGGT GGGCGCATTC CGCGCGGCCT GTTGCTGGTG
GGCCCACCGG GCACTGGCAA GACGCTGCTG GCCAAAGGCA TTGCCGGTGA AGCCAAGGTT
CCGTTCTTTT CGATTTCGGG TTCTGATTTT GTTGAAATGT TCGTCGGCGT CGGTGCTTCC
CGGGTGCGCG ACATGTTTGA GAACGCCAAG AAAAATGCAC CTTGCATTAT CTTTATCGAC
GAAATTGATG CTGTGGGTCG GCAACGTGGC GCCGGCTTGG GCGGTGGCAA TGACGAGCGT
GAACAAACAC TGAACCAGAT GCTGGTGGAG ATGGATGGTT TTGAGACCAA TGTTGGCGTG
ATCGTGGTGG CTGCCACCAA TCGCCCTGAC ATTCTTGACT CCGCGTTGCT GCGGCCGGGC
CGCTTCGACC GGCAGGTGTA TGTCACTCTG CCCGATATTC GGGGCCGTGA GCAAATTCTC
AATGTACACA TGCGCAAAGT GCCCTTGGGT CAGGATGTCA ATGCCGGGGT GATCGCACGC
GGTACACCGG GCATGTCGGG TGCCGATCTC GCTAATTTGT GCAATGAGGC GGCCTTGATG
GCGGCACGTC GCAATGCCCG CACGGTTGAG ATGGCGGACT TTGAAAAAGC CAAGGACAAA
ATTCTGATGG GCCCGGAGCG CAAGAGCATG GTCATGCCCG AAAGCGAGCG CAAGAACACG
GCTTATCACG AGTCGGGTCA CGCGTTGATC GGCAAGTTGT TGTCCAAGTG CGATCCGGTG
CACAAAGTGA CCATCATTCC GCGTGGTCGT GCCTTGGGCG TCACCATGAG TTTGCCAGCG
CAAGACCGCT ACAGCTACGA CAGCGAATAC ATGCTGCACC AGATCAGCAT GCTGTTTGGT
GGTCGTATTG CTGAAGAAGT GTTCATGAAC CAGATGACCA CCGGTGCCAG CAACGATTTT
GAGCGTGCTA CCCATATTGC GCGCGACATG GTGACGCGTT ATGGCATGAC CGATGCCCTG
GGTCCGATGG TCTATGCCGA GAATGAGGGC GAGGTGTTTT TGGGTCGCTC GGTCACCAAG
ACCACCACCA TGAGCGAAGA GACCATGCAG AAGGTTGACG CCGAGGTGCG CCGCATCATT
GACCAGCAAT ACAGCCTGGC GCGCAAGCTC ATTGAAGACA ATCGCGACAA GATGCACGCC
ATGGCCAAGG CCTTGCTGGA GTGGGAAACC ATTGACAGTG AACAGCTCGA CGACATCATG
GCCGGTAAAG AGCCCCGTCC GCCGAAAGAC TGGACGCCAC GTATCCCGCC CGCTGGCAGT
GACAGCAGCA GTGGTGGCAC GCCCGCCGTC AAAACGGATG TGGCGCCAAC GGCTGCCTGA
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| Protein sequence | MNNQWFSKIA VWLVIALVLF TVFKQFDARG PASAGYLGYS DFLEEVRNNR IKSAVIQEGQ
GGTEIVAVTT DDRRVRTTAT YLDRGLVGDL IANDVKFDVK PREEGSLLMT LLVSWGPMLL
LIGVWVYFMR QMQGGGKGGA FSFGKSKARL LDENTNLVTF ADVAGCDEAK EEVKEVVDFL
KDPAKFQKLG GRIPRGLLLV GPPGTGKTLL AKGIAGEAKV PFFSISGSDF VEMFVGVGAS
RVRDMFENAK KNAPCIIFID EIDAVGRQRG AGLGGGNDER EQTLNQMLVE MDGFETNVGV
IVVAATNRPD ILDSALLRPG RFDRQVYVTL PDIRGREQIL NVHMRKVPLG QDVNAGVIAR
GTPGMSGADL ANLCNEAALM AARRNARTVE MADFEKAKDK ILMGPERKSM VMPESERKNT
AYHESGHALI GKLLSKCDPV HKVTIIPRGR ALGVTMSLPA QDRYSYDSEY MLHQISMLFG
GRIAEEVFMN QMTTGASNDF ERATHIARDM VTRYGMTDAL GPMVYAENEG EVFLGRSVTK
TTTMSEETMQ KVDAEVRRII DQQYSLARKL IEDNRDKMHA MAKALLEWET IDSEQLDDIM
AGKEPRPPKD WTPRIPPAGS DSSSGGTPAV KTDVAPTAA
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