Gene Rfer_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2005 
Symbol 
ID3962229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp2160872 
End bp2161552 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content61% 
IMG OID637916825 
Productleucine export protein LeuE 
Protein accessionYP_523261 
Protein GI89900790 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.214703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTT ACGGCGTCAC CGACCTGTGG ACTTATGTTG TCGGTGCTTT CGGCATCATT 
TTGCTGCCTG GGCCCAACTC GCTGTATGTG CTGTCCGTGG CCACCGTGCG CGGTGTCCGT 
GCCGGCTATC AAGGCGCGTT TGGGGTGTTT GTGGGCGACA CTATTTTGCT GCTGTGTACC 
GCTTTGGGCG CGGCCAGCCT GCTGCGCACG CATCCGGCCG TGTTCATGGT GGTCAAGTAC 
GCCGGTGCGG CGTATCTGTT TTGGGTCGGG TTGAATTTGC TGCGTGGCGC CATCGCTGGC 
TTGCGCGCGC GTGCGGATGT TCTGCCGTCG ACGGCGGCGG CGCCTGCTCC CAAACCGGCA 
GCGGCGGCTG CGCACTTGCA GCGGCCATTT CGCCGGGCGC TGCTGATCAG CTTGCTCAAC 
CCAAAGGCGA TCTTGTTTTT GCTGTCGTTC TTTGTGCAGT TCATTGACCC TGCCTACGCC 
CAGCCTGAAG TGCCGTTTTT GATTTTGAGC GCCATTTTGA TGAGCTTCAG TGCCGCCTAC 
CTGACGGCGC TGATTTTTGC GGGTGCCCGG CTGGCGCAAG CCTTCAGCCA GCGCAAGCGG 
CTCTCAAGCG GGCTCTCCAG CCTGGTGGGT GGTTTGTTTG TCTGGTTTGG GGCCAAACTG 
GCCACAGCCA GCCTGAACTG A
 
Protein sequence
MSFYGVTDLW TYVVGAFGII LLPGPNSLYV LSVATVRGVR AGYQGAFGVF VGDTILLLCT 
ALGAASLLRT HPAVFMVVKY AGAAYLFWVG LNLLRGAIAG LRARADVLPS TAAAPAPKPA 
AAAAHLQRPF RRALLISLLN PKAILFLLSF FVQFIDPAYA QPEVPFLILS AILMSFSAAY 
LTALIFAGAR LAQAFSQRKR LSSGLSSLVG GLFVWFGAKL ATASLN