Gene Rfer_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2002 
SymbolrnhB 
ID3962226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp2158121 
End bp2158744 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID637916822 
Productribonuclease HII 
Protein accessionYP_523258 
Protein GI89900787 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTCACA CGCCATCCAT CAAACAGGCA TCGCTCCTGT GGGATGTTGC TGGATTGGTC 
GCCGGGGTGG ACGAGGCCGG GCGCGGCCCG CTGGCGGGCC CCGTGGTGGC CGCCGCCGTG 
ATCCTGGACG ACCTGCAGCC GATCAAAGGT TTGGCGGATT CCAAGATACT CAGCGCGCGG 
CGTCGCGAGC AGTTGTTTGA CGAGATTCGT GCCAAAGCTC TGTGCTGCTG CATTGCCCAG 
GCCAGCGTGG AGGAAATTGA GCGACTCAAC ATTCTGCAAG CCACGCTGCT CGCGATGCGC 
CGGGCGGTTG AGGGTCTGCG GCTTAAGCCC GCACTGGTGC TGGTGGATGG CAACCGGCTG 
CCGGTGTTGA CCATGCGGGC TGAAGCCATT GTCAAAGGCG ACGCACTGGT CGCTGCCATA 
TCGGCCGCCT CGATTCTGGC CAAGGTCCAC CGCGACCGCT GGTGCGCCGA GGTGGATGTG 
CAGTACCCGC AATATGGTTT TGCACGGCAC AAAGGCTATG GCACGGTGCA GCACCTGGCG 
GCCTTGACAA AGCATGGGGC TTGCCCGCAG CACCGCAAAA CCTTTGGCCC GGTGGCTGAG 
GTGTTGCGAG AGGCGCTGCC ATGA
 
Protein sequence
MLHTPSIKQA SLLWDVAGLV AGVDEAGRGP LAGPVVAAAV ILDDLQPIKG LADSKILSAR 
RREQLFDEIR AKALCCCIAQ ASVEEIERLN ILQATLLAMR RAVEGLRLKP ALVLVDGNRL 
PVLTMRAEAI VKGDALVAAI SAASILAKVH RDRWCAEVDV QYPQYGFARH KGYGTVQHLA 
ALTKHGACPQ HRKTFGPVAE VLREALP