Gene Rfer_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1980 
Symbol 
ID3964336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2127664 
End bp2129013 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content59% 
IMG OID637916800 
Productresponse regulator receiver modulated metal dependent phosphohydrolase 
Protein accessionYP_523236 
Protein GI89900765 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.247955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGATA ACAGCACCAC GACACCCGGC GCCAGTGCAG CGCTGCTGCC CACCATTTTG 
TGCGTCGACG ATGAACCCAA CATTCTGTCG GCGCTCAAAC GGCTGTTTCG CGGCAAAGGC
TGGCAGGTAC TGTCCGCCGA AGGGGGCCAG GCCGCCCTGG CGCTGCTGCA GACGCAGTCG
GTTGACCTGG TCATCTCCGA CATGCGCATG CCGGAGATGG ATGGTGCCCA GTTTTTGGCG
CAAGTGCGCG TACGCTGGCC CGACACGGTA CGCCTGCTGC TGACGGGTCA CTCCGACATC
GACGCCATCA TTGACGCCAT CAACCGGGGG GAGATTTACC GCTACATCAC CAAACCGTGG
GACGACAACG ACATCGTGCT GATCGTGCGC CAGGCGCTGG AGCGCCAGGC ACTGGAGCAT
GAGAAGAAGC GCCTGGAAGC GCTGACCACC CGCCAGAACG AAGAACTCAA GGCCCTCAAC
ACGAGTCTGG AAGCCAAGGT GGAAGCGCGC ACGACTGAAC TCAGGATCGC CAACGAGTCA
CTGCAAGACG CCAATGAGCG ACTGAAAAGC AGCTTCGTCA CTTCGATCAA GGTGTTTTCC
ACCCTGATGG AAATGCGCGG CGGCAATTTG GCCGGGCACT CGCGTCGTGT GGCCGATCTG
GCGCGGCGCA TGGCCACCAA GCTCAAACTC GACAGCAAAC TGGTGCAGGA TATATTTGTC
GCCGGCCTGT TGCACGAAAT TGGCAAGGTC GGTTTTGCCG ACGAACTGCT GAACACGCCG
GTGGCGATGA TGAAACCTGA ACAGTTGGAC GCCTACCGAA AACACACGGT GCAAGCCGAG
CAGTTGCTGC TGCCGCTGGC CGAATTGCGC GCTGCCTCTG ACATCATCAC GGCACAATTT
GAACGCTTTG ATGGCAGCGG CTTCCCAGCC CGGCTTGGCG GTCCAAACAT ACCTATCGGA
ACCCGGATTT TGTCGCTGGC CAGTGACTAC GACAACATGC AAATCGGCAC GCTGACGCAC
AGCCGTCTAA AGCCGGAAGA AGCCAAAACC CTGATTGTCC GTGGCAGCGG GCAGCGCTAT
GACCCGGAGG TGGTGAGCGC CTTCCTGGAA GTCTTCAGTG GCGTGCCACG ACAAGCCGCT
GACAAGGAAA GCTTTTCTGA AATGAGGGTC AAAGCGTGCA ACCTGAAAGC AGGCATGATG
CTGGCACGCG ATCTCCTCGC ACCGAGCGGC CTATTGATGC TGTCGGCAGA GCATGTGCTC
GATCAACGCA TGATCGGCAA GATCATCACT TTTGAAAAAT CAGGCGGCAT GGAATTAACC
GCCTACATTC GCGTGGCTAG CGCATCCTGA
 
Protein sequence
MTDNSTTTPG ASAALLPTIL CVDDEPNILS ALKRLFRGKG WQVLSAEGGQ AALALLQTQS 
VDLVISDMRM PEMDGAQFLA QVRVRWPDTV RLLLTGHSDI DAIIDAINRG EIYRYITKPW
DDNDIVLIVR QALERQALEH EKKRLEALTT RQNEELKALN TSLEAKVEAR TTELRIANES
LQDANERLKS SFVTSIKVFS TLMEMRGGNL AGHSRRVADL ARRMATKLKL DSKLVQDIFV
AGLLHEIGKV GFADELLNTP VAMMKPEQLD AYRKHTVQAE QLLLPLAELR AASDIITAQF
ERFDGSGFPA RLGGPNIPIG TRILSLASDY DNMQIGTLTH SRLKPEEAKT LIVRGSGQRY
DPEVVSAFLE VFSGVPRQAA DKESFSEMRV KACNLKAGMM LARDLLAPSG LLMLSAEHVL
DQRMIGKIIT FEKSGGMELT AYIRVASAS