Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1980 |
Symbol | |
ID | 3964336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2127664 |
End bp | 2129013 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637916800 |
Product | response regulator receiver modulated metal dependent phosphohydrolase |
Protein accession | YP_523236 |
Protein GI | 89900765 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.247955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGATA ACAGCACCAC GACACCCGGC GCCAGTGCAG CGCTGCTGCC CACCATTTTG TGCGTCGACG ATGAACCCAA CATTCTGTCG GCGCTCAAAC GGCTGTTTCG CGGCAAAGGC TGGCAGGTAC TGTCCGCCGA AGGGGGCCAG GCCGCCCTGG CGCTGCTGCA GACGCAGTCG GTTGACCTGG TCATCTCCGA CATGCGCATG CCGGAGATGG ATGGTGCCCA GTTTTTGGCG CAAGTGCGCG TACGCTGGCC CGACACGGTA CGCCTGCTGC TGACGGGTCA CTCCGACATC GACGCCATCA TTGACGCCAT CAACCGGGGG GAGATTTACC GCTACATCAC CAAACCGTGG GACGACAACG ACATCGTGCT GATCGTGCGC CAGGCGCTGG AGCGCCAGGC ACTGGAGCAT GAGAAGAAGC GCCTGGAAGC GCTGACCACC CGCCAGAACG AAGAACTCAA GGCCCTCAAC ACGAGTCTGG AAGCCAAGGT GGAAGCGCGC ACGACTGAAC TCAGGATCGC CAACGAGTCA CTGCAAGACG CCAATGAGCG ACTGAAAAGC AGCTTCGTCA CTTCGATCAA GGTGTTTTCC ACCCTGATGG AAATGCGCGG CGGCAATTTG GCCGGGCACT CGCGTCGTGT GGCCGATCTG GCGCGGCGCA TGGCCACCAA GCTCAAACTC GACAGCAAAC TGGTGCAGGA TATATTTGTC GCCGGCCTGT TGCACGAAAT TGGCAAGGTC GGTTTTGCCG ACGAACTGCT GAACACGCCG GTGGCGATGA TGAAACCTGA ACAGTTGGAC GCCTACCGAA AACACACGGT GCAAGCCGAG CAGTTGCTGC TGCCGCTGGC CGAATTGCGC GCTGCCTCTG ACATCATCAC GGCACAATTT GAACGCTTTG ATGGCAGCGG CTTCCCAGCC CGGCTTGGCG GTCCAAACAT ACCTATCGGA ACCCGGATTT TGTCGCTGGC CAGTGACTAC GACAACATGC AAATCGGCAC GCTGACGCAC AGCCGTCTAA AGCCGGAAGA AGCCAAAACC CTGATTGTCC GTGGCAGCGG GCAGCGCTAT GACCCGGAGG TGGTGAGCGC CTTCCTGGAA GTCTTCAGTG GCGTGCCACG ACAAGCCGCT GACAAGGAAA GCTTTTCTGA AATGAGGGTC AAAGCGTGCA ACCTGAAAGC AGGCATGATG CTGGCACGCG ATCTCCTCGC ACCGAGCGGC CTATTGATGC TGTCGGCAGA GCATGTGCTC GATCAACGCA TGATCGGCAA GATCATCACT TTTGAAAAAT CAGGCGGCAT GGAATTAACC GCCTACATTC GCGTGGCTAG CGCATCCTGA
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Protein sequence | MTDNSTTTPG ASAALLPTIL CVDDEPNILS ALKRLFRGKG WQVLSAEGGQ AALALLQTQS VDLVISDMRM PEMDGAQFLA QVRVRWPDTV RLLLTGHSDI DAIIDAINRG EIYRYITKPW DDNDIVLIVR QALERQALEH EKKRLEALTT RQNEELKALN TSLEAKVEAR TTELRIANES LQDANERLKS SFVTSIKVFS TLMEMRGGNL AGHSRRVADL ARRMATKLKL DSKLVQDIFV AGLLHEIGKV GFADELLNTP VAMMKPEQLD AYRKHTVQAE QLLLPLAELR AASDIITAQF ERFDGSGFPA RLGGPNIPIG TRILSLASDY DNMQIGTLTH SRLKPEEAKT LIVRGSGQRY DPEVVSAFLE VFSGVPRQAA DKESFSEMRV KACNLKAGMM LARDLLAPSG LLMLSAEHVL DQRMIGKIIT FEKSGGMELT AYIRVASAS
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