Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1968 |
Symbol | |
ID | 3963084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2113675 |
End bp | 2114814 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637916787 |
Product | chaperone protein DnaJ |
Protein accession | YP_523224 |
Protein GI | 89900753 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00646622 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAA GAGACTACTA CGAAGTCCTG GGCGTTCCCA AGAACGCATC GGACGAAGAA ATCAAAAAGG CTTATCGCAA ACATGCGATG AAGCATCACC CGGACCGCAA TCAGGGCGAC GCCTCCAAGG CGGCTGAGGA AAAATTCAAG GAGTCCAAGG AAGCCTACGA AATGCTGTCG GACCCGCAAA AGCGTGCGGC CTACGACCAG CACGGTCATG CCGGTGTTGA TCCCAATATG CGCGGCGGAC CCGGTGCGGA AGGTTATGGC GGGTTCGCCG AAGCCTTTGG CGATATTTTT GGCGACATGT TTGGCCAGCA GCGCGGTCGG GCCGGTGCGG GGGGTGGACG CCAGGTTTTC CGTGGCAGCG ATCTGAGCTA TGCGATGGAG GTGACGCTGG AAGAGGCGGC TCGGGGCAAG GATGCCCAGA TCCGGATTCC GAGCTGGGAC GCGTGCGACG TGTGCCATGG CAGCGGTGCC AAACCCGGCA CCCAGGCCAA GACCTGCGGC ACCTGCAGCG GCTCGGGCGC CGTGCAAATG CGCCAGGGCT TTTTCAGCGT GCAGCAAACC TGCCCGACCT GCCGCGGCAC TGGCAAAGTC ATTCCCGAGC CCTGCACGGC CTGTCATGGG CAGGGCAAGA TCAAAAAGCA GAAAACGCTG GAAGTCAAGA TTCCAGCCGG TATCGACGGT GGCATGCGCA TTCGCAGCGC CGGCAACGGG GAGCCTGGCA CCAACGGCGG CCCGGCCGGT GACCTGTACA TCGAAATCCG CCTCAAGAAA CACGACATTT TTGAGCGTGA CGGCGATGAC ATCCATTGCT CGGTGCCGAT CAGCATCATC ACGGCTTCGC TGGGTGGTGA AATTGATGTA CCAACACTGA GCGGCAAGGC CGCCATTGAT ATCCCCGAAG GAACCCAAAC CGGCAAGCAA TTCCGGCTGC GCGGCAAAGG TATCAAGGGC GTGCGCGCCA GCTATCCCGG TGATCTGTAT TGCCACATTC TGGTGGAGAC ACCGGTCAAG TTGAGCGAAC ACCAGCGCAA GCTGCTGCGC GAGCTTGACG AGTCGCTGAA AAAAGGGGGC AGCAAACATT CGCCCAGCGG CGACAGCTGG ACCGACCGGC TGAAAAGTTT TTTCAGTTGA
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Protein sequence | MAKRDYYEVL GVPKNASDEE IKKAYRKHAM KHHPDRNQGD ASKAAEEKFK ESKEAYEMLS DPQKRAAYDQ HGHAGVDPNM RGGPGAEGYG GFAEAFGDIF GDMFGQQRGR AGAGGGRQVF RGSDLSYAME VTLEEAARGK DAQIRIPSWD ACDVCHGSGA KPGTQAKTCG TCSGSGAVQM RQGFFSVQQT CPTCRGTGKV IPEPCTACHG QGKIKKQKTL EVKIPAGIDG GMRIRSAGNG EPGTNGGPAG DLYIEIRLKK HDIFERDGDD IHCSVPISII TASLGGEIDV PTLSGKAAID IPEGTQTGKQ FRLRGKGIKG VRASYPGDLY CHILVETPVK LSEHQRKLLR ELDESLKKGG SKHSPSGDSW TDRLKSFFS
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