| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1964 |
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| Symbol | |
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| ID | 3963080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2107914 |
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| End bp | 2110046 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916783 |
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| Product | putative dehydrogenase |
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| Protein accession | YP_523220 |
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| Protein GI | 89900749 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5322] Predicted dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.220999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAG TCGTCAGCAT CAGCTTGGGC GCGCGTGCCC AGGATTTTGA GTTTGTTGCA
TCCTTCATGG GACAGCAAAT CAGTGTTCAG CGCCTGGGCA CCGACGGCAG CACGAGCAAG
GCCGTAAGCC TGCTGAAACA CTGGGAAAAA CACGCCGATG TGCTGGGCTT GGGGGTCGCG
AAAGACAGCT ACAACGTCGG TTCCCGCCGC TACATTGAAA AAGACAGCGC CCGCATGGCA
GGCGTTGTCA AGCGCATCCC GGTGACCACC GGGGGTCGCT TGAACGACAT CCTGCAGGAA
TGGGCTTTGC GCCATGTGCA GATCAAGCTG GGCAACTATT TCAACAACGC CAGAACCCTG
TTTTTTTCCG GCATGAGCAA CTACAAGCTG GCAACGTGCA TGGCAGAGTA CAGCCAGAAC
CTGCAGTTTG CCGACCCGCT GTTGCAGTTC GGGGTGCCCA AGCTGCTGAC CTCGCTGAAT
GCCCTGGAGC TGTATGCCGC TGGTGCGCAC TACGTATCCG ACTGGGCGTT GCCAAGTGTG
ATGTCTTGCG CCCCCGTCAA GCAGTGGACC CGTTTCGTTC TGGGCAAGGC GATGCAGGAA
GCGACCGTGA TCGTGGCACC GGTGCATGAA CTGGACGATT TCAATGCGGA AGAATTGGCT
GGCAAGACCC TCATCACCAC CTCTGTCAAT GACGAGCGCT TGGCCCGATT CAAGGAGAAG
GGCGTTCACC TGGTGATTGA TGGCGCGCCC AGAATGTTCG AGCACGTGCT GGGCCCCAAT
ATCCTGGATG CCATGATCAT CGCCGCCAGC GGCAAGAACC CACCAGATCT GCTGGAGGAC
GACTACCTGG AAATCATCAC CGATTTGCAG ATGGAACCAC GCCTTCTGTA CCCAGGCGGA
TTCAAACGTG TCAACCGCTT TGCCTTCGTC ATCCATCCCC TGTCGCAGGA GTATTTCAAG
GTGGTCAAGC CCATCGAGTT GCTGTCGCAG GTCTCGCCGC CCCTGTTCAT GGACTCACTG
GAAAAGGTGC TGGCCTATGC CCCGCCTTTT GTTTATTCAA GGGTGACGGG AATCAAGTCG
CCCACGGGTG TGGAAGCTGA AGGGTGGCTG ATTTCGGTGG GGGGAACACC CAGGGAGATC
ATGGCCCACA GCCCCGAATT TACCTACCGC CGCTTGCTGG CCGCGGCCGA CATGGCCCAA
AAGCTGGGCG CGCAGATCAT GGGCCTGGGC GCTTTCACCA AGGTGGTGGG CGATGCGGGG
CTGACCGTCG CCAAACGCGC GCCCCTGCCT ATCACCACGG GCAACAGCTA CAGCGCCTCC
GGGGCGCTGT GGGCCGCGCA TGATGCCTTG TTGCGTATGC GACTGCTACC CATGCCCAGA
AAGGGCCAGA AAGTGCAATT CAAGGCCATG GTGGTCGGCG CCACCGGGGC TATCGGCTCG
GTCTGCGCCC GCCTGCTGGC CACTTTCGCC GAGGAGCTTT ACCTCGTCTC CCCAGAGACC
GCCAAACTGC TGTCGCTCAA GGACTCCATC CTGAAAGAGA CACCGGACGC CCGGCTGTTT
CTGTCAGCCC GGGCCAACAA GGACATTGCC GGCATGGACA TGATCGTGAC CGCCACCTCC
GGCGCCGGCA GGAAGGTGCT CGACATCATG AAGGTCAAGC CCGGCTGCGT CATCACCGAT
GTGGCACGCC CGCTGGACCT GCCGCCCGAG GAGGTCGTTA AGCGCCCGGA TGTGCTGGTG
ATCGAATCCG GCGAAATCCA GCTGCCAGGG GATGTCCAGA TGAAGAACAT CGGCCTGCCC
AAAAACCTGG CCTATGCCTG CCTGGCCGAG ACCATCGTGC TGGCCTTGGA GGGGCGGTTC
GAGAACTACA CGGTCGGCCG TTCCATCGAA TGGGAGAAGG TGCGCGAGAT CTACCGCCTG
GGCCTAAAGC ATGGCATGAA GCTGGCGGCC ATCTCCGGCG TCAATGGCGT GTTTTCCGAT
GCAGACATTG AGCGTGTGCG CGAGCTGGCC TTGGCGGCGC GTGCCGGAAA AACGCGGACA
GCCCGAAAAG CGGGGGCCGT CAAACCGGTG GCCCCAGCGC GGACAAAACC GGTAACAGCC
GTGAAAAGAA AACCGAGACT GCAAGCCAGA TAG
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| Protein sequence | MKRVVSISLG ARAQDFEFVA SFMGQQISVQ RLGTDGSTSK AVSLLKHWEK HADVLGLGVA
KDSYNVGSRR YIEKDSARMA GVVKRIPVTT GGRLNDILQE WALRHVQIKL GNYFNNARTL
FFSGMSNYKL ATCMAEYSQN LQFADPLLQF GVPKLLTSLN ALELYAAGAH YVSDWALPSV
MSCAPVKQWT RFVLGKAMQE ATVIVAPVHE LDDFNAEELA GKTLITTSVN DERLARFKEK
GVHLVIDGAP RMFEHVLGPN ILDAMIIAAS GKNPPDLLED DYLEIITDLQ MEPRLLYPGG
FKRVNRFAFV IHPLSQEYFK VVKPIELLSQ VSPPLFMDSL EKVLAYAPPF VYSRVTGIKS
PTGVEAEGWL ISVGGTPREI MAHSPEFTYR RLLAAADMAQ KLGAQIMGLG AFTKVVGDAG
LTVAKRAPLP ITTGNSYSAS GALWAAHDAL LRMRLLPMPR KGQKVQFKAM VVGATGAIGS
VCARLLATFA EELYLVSPET AKLLSLKDSI LKETPDARLF LSARANKDIA GMDMIVTATS
GAGRKVLDIM KVKPGCVITD VARPLDLPPE EVVKRPDVLV IESGEIQLPG DVQMKNIGLP
KNLAYACLAE TIVLALEGRF ENYTVGRSIE WEKVREIYRL GLKHGMKLAA ISGVNGVFSD
ADIERVRELA LAARAGKTRT ARKAGAVKPV APARTKPVTA VKRKPRLQAR
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