| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1953 |
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| Symbol | |
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| ID | 3963069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2097181 |
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| End bp | 2098185 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916772 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_523209 |
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| Protein GI | 89900738 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.186843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGTT TTCTCTTAAC CCGCTTCAGC CTGATCATCC CGACCTTCAT CGGCATGACG
CTGTTGGCGT TCTTCCTGAT TCGCCTGGTA CCGGGGGATC CGATTGAGAC CCTGGCGGGC
GAACGCGGCA TCGATGCCGT GCGCCACGCC ACCCTGCTCA AGGAGTACGG ACTGGACCGC
CCGGTGCTGG TGCAATACGG CATTTACATC GGCCGTGTGC TGCAAGGCGA TCTGGGCAAA
TCGATCATCA CCCACGAACC CGTGCTGCGT GAGTTCATGA CACTGTTTCC CGCCACCATT
GAACTCGCGC TATGCGCGAT TTTTTTCGCC TTGTTGCTGG GCATTCCGGC GGGTATTCTG
GCGGCGGTAC GACGAAATAC GATATTCGAC CATGGCGTGA TGGGTGTGTC ACTCACCGGC
TATTCGATGC CGATCTTCTG GTGGGGCTTG CTGCTGATCC TGCTGTTTTC AGTGCAACTC
GACCTGACGC CGGTGTCAGG TCGCATTGCC GTGGAGTATT TCATTGAACC CGTCACCGGC
CTGCTGCTGA TTGACAGCTG GCTGGCTGGC GACAAAGGGG CCTTCTGGTC CGCCTTCACC
CATTTGATTT TGCCGACCAT CGTGCTCGGG ACCAATCCAT TGGCGGTAAT TGCCCGCATG
ACGCGCTCAG CCATGCTTGA AGTACTGGGT GAAGACTACA TTCGCACCGC GCGCGCCAAG
GGCTTGTCCA ACCTGCGGGT GGTCGGTCTG CACGCCTTGC GCAATGCGCT GATTCCGGTG
ATCACGGTGA TTGGATTACA GGTCGGTGTG CTGTTTACCG GCGCCATCCT GACCGAAACC
ATTTTTTCCT GGCCGGGCGT GGGCAAGTGG CTGATTGAAG CGATTGGCCG ACGCGACTAT
CCCGTTTTGC AAGGTGGCAT GCTGCTGCTC GGCATGATCG TGATGACGGT CAACCTGCTG
GTGGACGTGA CCTACGGCAT CATCAACCCC CGCATCCGGC ACTGA
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| Protein sequence | MLRFLLTRFS LIIPTFIGMT LLAFFLIRLV PGDPIETLAG ERGIDAVRHA TLLKEYGLDR
PVLVQYGIYI GRVLQGDLGK SIITHEPVLR EFMTLFPATI ELALCAIFFA LLLGIPAGIL
AAVRRNTIFD HGVMGVSLTG YSMPIFWWGL LLILLFSVQL DLTPVSGRIA VEYFIEPVTG
LLLIDSWLAG DKGAFWSAFT HLILPTIVLG TNPLAVIARM TRSAMLEVLG EDYIRTARAK
GLSNLRVVGL HALRNALIPV ITVIGLQVGV LFTGAILTET IFSWPGVGKW LIEAIGRRDY
PVLQGGMLLL GMIVMTVNLL VDVTYGIINP RIRH
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