| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1938 |
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| Symbol | |
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| ID | 3964120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2080070 |
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| End bp | 2081467 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637916758 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_523195 |
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| Protein GI | 89900724 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.1825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAG CCGTTGCTGA ACCAATTTCC GAAGACCTCA TCCGTCGTTT CGATGTATCG
GGACCGCGTT ATACCTCTTA TCCCACCGCG GACCGTTTTG TTGAGGCATT TTCAGTTGAG
GACTATACCC AAGCCTTGAA GCTTCGGCGG GCTGGGGGGG CGGCCATGAC GCTGCCATTG
TCTTTATATG TTCACATCCC TTTCTGTGAA TCCCTGTGTT ATTACTGCGC CTGCAACAAG
ATCATCACCA AGCACCATGA TCGGGCCGGC CCTTATTTGC GCTACCTGAG CCGCGAAGTC
GATTTGCACA CGGAGCAACT GGGTGTAGGA CAAACGGTGA CCCAATTGCA TCTGGGTGGT
GGCAGTCCCA CTTTTTTGAC GGATGATGAG CTGCGCGAGT TGATGGCCAT GTTGCGGCGC
AACTTTACCT TCGCCCCAAG CGGTGAATAC TCGATCGAGG TGGACCCGCG CACCATCGAC
GCGTCGCGGC TCGATACCTT GGCCGAGTTG GGATTCAATC GTTTGAGCTT TGGGATTCAG
GATTTCGACC CTGATGTTCA AAAATCGGTA CACCGTGTGC AGCCGGCCGA ACAGGTTTTT
GCCTTGGTGG CAGCCGCCCG CGAACGCGGT TTTGATTCCA TCAATGCGGA CCTGATTTAT
GGCCTGCCTC TGCAAAGCCC GGAGTCATTT GACCGCACAC TGGCGCAGGT GGTCGAGTTG
CGGCCGGAGC GTATTGCCTT GTACGCCTAT GCCCACTTGC CCGAGCGTTT CAAGCCCCAG
CGCCGCATTC CGACCGTGGA GATTCCCAGC GGTGCGGCCA AGGTGGCCAT GCTGGCGCGG
TCCATGGCCG CTTTTATGGG TGCTGGTTAT GTCTATGTCG GGATGGACCA CTTTGCATTG
CCGACGGACT CGCTGGCGAT TGCCAAGCGG CAAGGTCGGC TGCATCGCAA TTTTCAGGGC
TACAGCACCC AACCCGATTG CGACCTGATT GGACTTGGCG TGTCGTCGAT CGGCCGGATT
GGCGCCACCT ATAGCCAGAA TGCCAAGACC CTGGAAGAGT ATTACGACTA TCTGGATCAG
GGGCGCTTCC CCGTGGTGCG CGGCTTGGCG TTGACGCGTG ACGACCTGTT GCGTCGCGCC
GTGATCATGG CCATCATGTG CCAAGGGCAA GTTCTGTTCG AGTCCATTGA GTTGGCGCAT
CTGATCGAAT TTCGCAAGTA CTTTGCGCCT GAAATGGAAG CCCTGCAAAA GCTGGCGGAT
CAGGGCATGG TCACGGTGGA CGATGTCGGC ATTCAGGTCA CTGACATGGG CTGGTTTTTT
GTCCGCGCCG TGGCCATGGT GTTTGATCGC TATTTGCAGA CCGACCGCAC GCGCGCGCGG
TTTTCCAAGA TTATCTGA
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| Protein sequence | MNTAVAEPIS EDLIRRFDVS GPRYTSYPTA DRFVEAFSVE DYTQALKLRR AGGAAMTLPL
SLYVHIPFCE SLCYYCACNK IITKHHDRAG PYLRYLSREV DLHTEQLGVG QTVTQLHLGG
GSPTFLTDDE LRELMAMLRR NFTFAPSGEY SIEVDPRTID ASRLDTLAEL GFNRLSFGIQ
DFDPDVQKSV HRVQPAEQVF ALVAAARERG FDSINADLIY GLPLQSPESF DRTLAQVVEL
RPERIALYAY AHLPERFKPQ RRIPTVEIPS GAAKVAMLAR SMAAFMGAGY VYVGMDHFAL
PTDSLAIAKR QGRLHRNFQG YSTQPDCDLI GLGVSSIGRI GATYSQNAKT LEEYYDYLDQ
GRFPVVRGLA LTRDDLLRRA VIMAIMCQGQ VLFESIELAH LIEFRKYFAP EMEALQKLAD
QGMVTVDDVG IQVTDMGWFF VRAVAMVFDR YLQTDRTRAR FSKII
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