Gene Rfer_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1933 
Symbol 
ID3964115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2076141 
End bp2077058 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content54% 
IMG OID637916753 
Productcytochrome c oxidase, cbb3-type, subunit III 
Protein accessionYP_523190 
Protein GI89900719 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0570892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACT TTACAAGCAA TTTCTGGTCG ATATATGTCG CCGGAATCAC CATCGTCAGT 
ATCGTGGCCT GTTTGCTGCT GCTGATATTG ACCGGCAAGT CCAAAGGCAT GTCGACCAGC
GATAACACTA CCGGGCATGT GTGGGATGGC GATTTGCGGG AGATGAACAA CCCCCTGCCG
CGCTGGTGGG CCTGGTTGTT TGTCATCACG ATTGTTTTTT CCTTCATCTA TCTGGCGCTG
TATCCAGGGC TAGGCACTTA TGGCGGCAAG TTGGGCTGGA CGTCCGTTGG GCAACACCAG
GCGGAGGTCG ATAAAGGCAA TGCCGAGGTC GCCCCCTTGT ATGCCAAATT TTCAGCCATG
AAACCCGAAG ACGTGGCCAA AGATGCACAG GCCATGGCTA TTGGTGAGCG TTTGTTCATG
AACAACTGCG CCCAGTGCCA CGGCTCTGAT GCTCGCGGCA ACAAGGGTTT TCCGAACCTG
ACTGACAACG ATTGGTTGGG TGGCGGTACG CCGGAGATTA TCAAAGCCGA CATCACCAAG
GGTCGTATTG CCGTGATGCC ACCGATGGCA GCGGCTGTCG GCACGGCAGA AGATGTCAAG
AACCTGGCAC AGTATGTGTT GAGCCTGTCT GGTAGCCCAC ACGATTCTGT TCAGGCAGCC
CTCGGTAAGG AAAAATTTGC TGTCTGCGCC GCTTGTCACG GTATCGACGG TAAGGGTAAC
CAGACACTTG GTTCAGCCAA CTTGACAGAC AACATTTGGT TGCACGGCTA TGGCGAGGCT
GCCATTGTTG CCATGATCAA TGAGGGCAAG ACAAACCAGA TGCCCGCCCA GGCTGATAAG
TTGACAGAGG CTCAGGTTCA CGTGTTGGCT TCTTATGTTT GGGGGCTTTC CAACAAGGGC
GGTATCGCCG CTCAGTAA
 
Protein sequence
MSDFTSNFWS IYVAGITIVS IVACLLLLIL TGKSKGMSTS DNTTGHVWDG DLREMNNPLP 
RWWAWLFVIT IVFSFIYLAL YPGLGTYGGK LGWTSVGQHQ AEVDKGNAEV APLYAKFSAM
KPEDVAKDAQ AMAIGERLFM NNCAQCHGSD ARGNKGFPNL TDNDWLGGGT PEIIKADITK
GRIAVMPPMA AAVGTAEDVK NLAQYVLSLS GSPHDSVQAA LGKEKFAVCA ACHGIDGKGN
QTLGSANLTD NIWLHGYGEA AIVAMINEGK TNQMPAQADK LTEAQVHVLA SYVWGLSNKG
GIAAQ