Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1933 |
Symbol | |
ID | 3964115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2076141 |
End bp | 2077058 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637916753 |
Product | cytochrome c oxidase, cbb3-type, subunit III |
Protein accession | YP_523190 |
Protein GI | 89900719 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0570892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACT TTACAAGCAA TTTCTGGTCG ATATATGTCG CCGGAATCAC CATCGTCAGT ATCGTGGCCT GTTTGCTGCT GCTGATATTG ACCGGCAAGT CCAAAGGCAT GTCGACCAGC GATAACACTA CCGGGCATGT GTGGGATGGC GATTTGCGGG AGATGAACAA CCCCCTGCCG CGCTGGTGGG CCTGGTTGTT TGTCATCACG ATTGTTTTTT CCTTCATCTA TCTGGCGCTG TATCCAGGGC TAGGCACTTA TGGCGGCAAG TTGGGCTGGA CGTCCGTTGG GCAACACCAG GCGGAGGTCG ATAAAGGCAA TGCCGAGGTC GCCCCCTTGT ATGCCAAATT TTCAGCCATG AAACCCGAAG ACGTGGCCAA AGATGCACAG GCCATGGCTA TTGGTGAGCG TTTGTTCATG AACAACTGCG CCCAGTGCCA CGGCTCTGAT GCTCGCGGCA ACAAGGGTTT TCCGAACCTG ACTGACAACG ATTGGTTGGG TGGCGGTACG CCGGAGATTA TCAAAGCCGA CATCACCAAG GGTCGTATTG CCGTGATGCC ACCGATGGCA GCGGCTGTCG GCACGGCAGA AGATGTCAAG AACCTGGCAC AGTATGTGTT GAGCCTGTCT GGTAGCCCAC ACGATTCTGT TCAGGCAGCC CTCGGTAAGG AAAAATTTGC TGTCTGCGCC GCTTGTCACG GTATCGACGG TAAGGGTAAC CAGACACTTG GTTCAGCCAA CTTGACAGAC AACATTTGGT TGCACGGCTA TGGCGAGGCT GCCATTGTTG CCATGATCAA TGAGGGCAAG ACAAACCAGA TGCCCGCCCA GGCTGATAAG TTGACAGAGG CTCAGGTTCA CGTGTTGGCT TCTTATGTTT GGGGGCTTTC CAACAAGGGC GGTATCGCCG CTCAGTAA
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Protein sequence | MSDFTSNFWS IYVAGITIVS IVACLLLLIL TGKSKGMSTS DNTTGHVWDG DLREMNNPLP RWWAWLFVIT IVFSFIYLAL YPGLGTYGGK LGWTSVGQHQ AEVDKGNAEV APLYAKFSAM KPEDVAKDAQ AMAIGERLFM NNCAQCHGSD ARGNKGFPNL TDNDWLGGGT PEIIKADITK GRIAVMPPMA AAVGTAEDVK NLAQYVLSLS GSPHDSVQAA LGKEKFAVCA ACHGIDGKGN QTLGSANLTD NIWLHGYGEA AIVAMINEGK TNQMPAQADK LTEAQVHVLA SYVWGLSNKG GIAAQ
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