| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1895 |
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| Symbol | |
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| ID | 3963224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2034268 |
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| End bp | 2035176 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637916715 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_523152 |
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| Protein GI | 89900681 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGGGT CTGACTTCAT CAAGCCGCCC GCCCGCAACG GCGTCGGGCC CAGCTGCATC
GGGCTGCCCG CCGGCGCCTG GCCCACCACC CTTGATTTCT TGACCGAGCG CTTTTCCGCC
ATCCCTCGGG ACGTCTGGCA CCAGCGCATG GCGCAGGGCG ATGTGGTCGA TGAGCACGGC
GTGCAGCTCG CGCCCCACAG CGCCTACCAG GGCCACAGAA GGGTCTACTA CTACCGCGCG
GTGCCGGATG AGCCGCGCAT CCCGTTTGAT GAGGTGATCC TGTTCCAGGA CGAGCAGCTG
ATCGTGGTCG ACAAGCCGCA TTTTTTACCC GTGATGCCCT CGGGCGGCTA CCTGGCAGAG
ACCGTGCTGG TGCGACTGAA GCAAAAACTG GGCATCGACA CGCTGGTGCC GGTGCATCGC
ATTGACCGCG ACACCGCCGG GCTGGTGATG TTCTCCGTGC AGCCCGAAAC CCGGGCCGCC
TACCACGCGC TGTTCAGCCA GCGCAGCGTC AAAAAGACCT ACGAAGCGAT TGCCCCGTGG
CGCGAGGGTT TGGCGCTGCC GATGACGCGC CAAAGCCGCA TCGTCGAGGC CGGCCACTTC
ATGCTGCAGC ACGAGGTCAG CGGCCCGCCC AACACCGTGA CCCGGATTGA GGTGCTGCAA
GTGCAGGGCG GCCTGGCCCG CTACCAGCTC CAACCCGTCA CCGGCAAACG CCACCAGTTG
CGTGTGCACA TGGCGGCTTT GGGCCTGCCG ATTCTGGGCG ATGGCCTGTA CCCTACCCTC
ACACCCGAAG GACAAGTTGA CTACGAGCAC CCCCTGCAAC TGCTGGCCCG GCGCATTGAG
TTTGTCGACC CGGTCAGCGG GCAAGCCCGG CAGTTTGAGA GCCGGCGCAG CTTGATGAGC
CTGGCGTGA
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| Protein sequence | MSGSDFIKPP ARNGVGPSCI GLPAGAWPTT LDFLTERFSA IPRDVWHQRM AQGDVVDEHG
VQLAPHSAYQ GHRRVYYYRA VPDEPRIPFD EVILFQDEQL IVVDKPHFLP VMPSGGYLAE
TVLVRLKQKL GIDTLVPVHR IDRDTAGLVM FSVQPETRAA YHALFSQRSV KKTYEAIAPW
REGLALPMTR QSRIVEAGHF MLQHEVSGPP NTVTRIEVLQ VQGGLARYQL QPVTGKRHQL
RVHMAALGLP ILGDGLYPTL TPEGQVDYEH PLQLLARRIE FVDPVSGQAR QFESRRSLMS
LA
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