Gene Rfer_1888 details

Gene Information

• Locus tag: Rfer_1888
• ID: 3962266
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 2025912
• End bp: 2026520
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637916708
• Product: CheC, inhibitor of MCP methylation
• Protein accession: YP_523145
• Protein GI: 89900674
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.380829
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGATCA CTGGCGCCCA GCTCGACGCA TTGACCGAGA TATTCAACAT TGGCGCCGGG 
CGCGCGGCGT CCAGCCTGAG CGACATCGTG GGCGACGAAG TCCTGCTGTC GGTGCCCCGC 
GTCGAGTTTT ACCGTGCCCA CGAGGTCAAC GCCAAAGTGT TGTCGCTTTC CTCGGCGCGA 
CTCGGCTCGG TCAAACAAAA ATTCAGGGGG CCGTTCAACC TGACAGCCTC CCTCTTGTTC 
ACCGAAGAGC GGGCCCTGGA AATTGTGCAG GAGATGCTGG GCTCGCAAGT GCAGAAAGAG 
GACTTGGTCG AATATGAACA AGAGGCCATG TGCGAGGTCG GCAACATCAT TTTGAACGCC 
TGCCTGTCGG CCATGGCGGA CATGCTGGGC ATTTCCTTTG AAAGCACGCT GCCCGAGTAT 
TCGAGCGCTG AGCCCGACGT TGTCATTGAA CGCCTGGTCG CCGACGCCGA CAATCCATTG 
ATGCTGGTTT TGCACATCAA TATGCTGATC GAAAAGCGAC GCAGCCAGGG AACCCTGATT 
TTCTGGTTGA GCTCCTCGTC TTTGCAGGAA CTGATGCTTC ATCTTGAACA GTTCGTCTCC 
CGTATCTAG 

 

Protein sequence

MTITGAQLDA LTEIFNIGAG RAASSLSDIV GDEVLLSVPR VEFYRAHEVN AKVLSLSSAR 
LGSVKQKFRG PFNLTASLLF TEERALEIVQ EMLGSQVQKE DLVEYEQEAM CEVGNIILNA 
CLSAMADMLG ISFESTLPEY SSAEPDVVIE RLVADADNPL MLVLHINMLI EKRRSQGTLI 
FWLSSSSLQE LMLHLEQFVS RI