| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1836 |
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| Symbol | |
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| ID | 3963011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1973520 |
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| End bp | 1975466 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916656 |
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| Product | ABC transporter related |
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| Protein accession | YP_523093 |
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| Protein GI | 89900622 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0483035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA ACAGCAAATC TTTTCTCCTG ATGGTGCTGG GCCTGGCGGC CTTGGGCTTG
TACCCGGTGC TGGTACCCAA CCCCTACTAC ATCCACCTCG TCGAGACCAT CCTTATCTAC
GCCATCCTGC TGTTCGGGCT GGATATCGTG GTGGGCTACA CGGGCCAGGT GTCGTTGGGT
CATGCGGGCC TGTTCGGTGT GGGTTCGTAC ACCGCCGGTG CCCTGTTCTT CAAGCTGGGT
GCGCCTTTTC TCCTAGCCGT TCCTGCCGCC ATTGGCGTCA CGGCGCTGTT CGGTGCCGTG
CTGGCGCTCC CTGCCCTGCG GGTGACAGGC CCTTACCTGG CCATGGTGAC GCTGGCATTC
GGCACCATCA TCCAGATTCT GATTAACGAG ATGACGTTTT TGACCGAAGG CCCGATTGGT
ATCAAGGTAC ACAAGCCGAT GTTCTTTGGC CACAAGCTGA CCGAGGTCGA GTATTTTTAC
GTGGTTGCCG TGCTGATGGT ACTGGCGCTG GTGGTGGTGC ACCGCATCCT GAAATCCCAT
CTGGGCCGTG CCTTCGAGGC CCTGCGCGAC AGCCCGGTGG CGTGTGATTG CATGGGGGTT
TCTGTCTACC GCTATAAGGT TTATGCCTTC GTGATCAGTG CCGCACTGGC AGGTCTGGCG
GGCTCGCTGT ACGCCTATTC GGAAGAATAT ATTTCACCCA ACACTTACAA TTTTGAGCTG
ACCATCATGT TCCTGCTGGC AGTCATCATG GGCGGGCGGA AAACCCGCTC GGGAGCCTTG
ATTGGGGCCG TGATTGTGGT GATGTTGCCC AGCTTGCTGT CGGACATCGA GCTCTTTCGC
AAGATCGCAA CCGTGCTGGC AATCGCCGTG AGCGGCATGG CGGTTTACAA CTTCATTCGA
AAAGTCAAGA CAGTGCGCGA GTTGGCCGTG CCCGTGCTCG CCACGGTGGC CATGGCGGGG
TTTTCCTTTA GGCTGGAAAA CATCACCGAT TGGCGCCTGA CCATTTTTGG CCTGATGACC
CTGTTTGTGG TCTATTACCT GCAAGATGGT GTTGTGGGTT TTGCGCGTGA ACTGTTCGCG
CGTTTTGCCA AACCCGCAGC GCACGCCAGC GGCAAGACCC CAAGCATCAA GGTGCGCGCC
TGGACCACGC CCCACAAGGC GGCTCCCGTT AGCGCAGGTC CGCTGCTCGA TGCGCAGCAG
GTGTTGATGC AATTCGGTGG CCTCAGAGCC CTCAATCAGG TGGACTTGAG CATTGCGCAC
GGATCAATTC ACGGACTCAT CGGGCCCAAC GGGTCGGGCA AGAGCACGAT GATGAATGTG
CTGACTGGCA TTTACCAGCC CACCGCCGGC CAGGTGGTGT TCAATGGCCA GTCTTTGGCC
GGTCAAACAC CGTCACACAT TGCGTTGTCA GGTATTGCAC GCACCTTCCA AAACGTGCAG
CTTTTTGGTG AGATGACCGC CACTGACAAC GTGCTGGTGG GTTTGCATCA CACGTTCAAG
AGCAACACGC TCGACGTGAT GCTGCGCACA CCGCGCTATC TGCGCGAGGA CGCGGCCGCC
CGCGAGCAGG CTGCGAGTTT GCTGGACTTT GTTGGCTTGA CGGATCTGAG CGAAGAACAG
GCACGCAACC TGCCCTACGG CAAGCAACGT ATGCTGGAAA TCGCCCGTGC GTTGGGCCTG
GGGCCACGTT TGCTGTTGCT CGACGAGCCC GCTGCAGGCT TGCCGCCAGC CGACTTGCCG
GAACTGACCA AGATGATCCA GAAGATTCGC GACCATGGCA TCACCGTGAT TTTGATCGAG
CACCACATGG ACGTGGTGAT GGGGATTTCA GACACGGTGT CGGTGCTTGA CTTCGGCCAA
AAAATTGCCG AAGGAAAACC CGCTGATGTT CAAAGTAACC CAGCCGTGGT CGAAGCCTAT
TTGGGCAGCG GCGAAGGCGC GCACTGA
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| Protein sequence | MKINSKSFLL MVLGLAALGL YPVLVPNPYY IHLVETILIY AILLFGLDIV VGYTGQVSLG
HAGLFGVGSY TAGALFFKLG APFLLAVPAA IGVTALFGAV LALPALRVTG PYLAMVTLAF
GTIIQILINE MTFLTEGPIG IKVHKPMFFG HKLTEVEYFY VVAVLMVLAL VVVHRILKSH
LGRAFEALRD SPVACDCMGV SVYRYKVYAF VISAALAGLA GSLYAYSEEY ISPNTYNFEL
TIMFLLAVIM GGRKTRSGAL IGAVIVVMLP SLLSDIELFR KIATVLAIAV SGMAVYNFIR
KVKTVRELAV PVLATVAMAG FSFRLENITD WRLTIFGLMT LFVVYYLQDG VVGFARELFA
RFAKPAAHAS GKTPSIKVRA WTTPHKAAPV SAGPLLDAQQ VLMQFGGLRA LNQVDLSIAH
GSIHGLIGPN GSGKSTMMNV LTGIYQPTAG QVVFNGQSLA GQTPSHIALS GIARTFQNVQ
LFGEMTATDN VLVGLHHTFK SNTLDVMLRT PRYLREDAAA REQAASLLDF VGLTDLSEEQ
ARNLPYGKQR MLEIARALGL GPRLLLLDEP AAGLPPADLP ELTKMIQKIR DHGITVILIE
HHMDVVMGIS DTVSVLDFGQ KIAEGKPADV QSNPAVVEAY LGSGEGAH
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