Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1796 |
Symbol | gltA |
ID | 3962193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1934395 |
End bp | 1935705 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637916619 |
Product | type II citrate synthase |
Protein accession | YP_523056 |
Protein GI | 89900585 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.216782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAG CTGACAATAA AGCCACCCTG TCGTTCAGCG ACGGCAAACC CAGCATCGAC TTGCCGGTGT ACCAAGGCAC CGTCGGACCG GATGTGATTG ACATTCGCAA GTTGTACGGT CAGACCGGCA TGTTCACCTA TGATCCGGGT TTCTTGTCCA CGGCTTCGTG CCAGTCGGCC ATCACTTACA TTGACGGTGA CAAAGGTGAA CTGCTGTACC GCGGCTATCC CATCGAGCAG TTGGCCACCA ACTGCGATTT CATGGAAACC TGCCATTTGC TGCTGTACGG AAACCTGCCG GATGCCGCAG GCAAGGAAGT ATTCACCAAA CGTGTGACCA ACCACACCAT GGTCAGCGAG CAGATGCAGT TTTTCCTGCG CGGCTTTCGG CGTGACGCCC ATCCGATGGC CATCATGACC GGCCTGGTCG GCGCCCTGTC GGCGTTCTAC CATGACAGCA CCGATATCAA CAACCCTGAG CATCGTGAAA TTTCGGCGAT CCGGCTGATC GCCAAGATGC CGACTCTGGT GGCCATGGCC TACAAATACA GCGTCGGCCA GCCTTACATG TATCCGCAGA ACGACCTCAG CTATGCGGGC AACTTCATGC GCATGATGTT TGCCACACCC TGCGAAGAAT ACAAGGTCAA TCCGATCATT GAACGCGCCA TGGATCGCAT CTTTATCCTG CATGCAGACC ACGAACAAAA CGCATCTACT TCCACTGTTC GACTGTGCGG CAGTTCAGGA ACCAACCCGT TTGCGGCAAT TGCAGCTGGC GTGGCTTGTC TGTGGGGCCC GGCCCATGGT GGCGCCAACG AAGCTTGTTT GAACATGCTT GGTGAGATCC AGCAAATGGG CGGCATCGCC AAAGTTGGTC ATTTCATGGA ACAGGTCAAG GACAAGAATT CTGGCGTCAA GCTGATGGGC TTTGGACACC GGGTTTACAA GAACTACGAT CCACGCGCCA AACTGATGCA GGAAACTTGC AAAGAGGTTC TGGGTGCGCT CGGCCTGGAA AATGACCCTC TGTTCAAGCT GGCCATGGCC CTGGAAAAGA TTGCGCTGGA AGACGAATAC TTTGTCTCGC GCAAGCTCTA CCCCAACGTC GATTTCTACT CGGGTATCGT GCAACGTGCC ATCGGCATTC CAGTCAACAT GTTCACCGGG GTTTTCGCAC TGGCCCGCAC TGTCGGCTGG ATTGCCCAAC TTAACGAGAT GATCAGCGAC CCTGAATACA AAATTGGTCG TCCGCGTCAA CTGTTCTCTG GTTCTGTCAA ACGGGATGTT CTGCCGATTT CCAAACGCTG A
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Protein sequence | MKLADNKATL SFSDGKPSID LPVYQGTVGP DVIDIRKLYG QTGMFTYDPG FLSTASCQSA ITYIDGDKGE LLYRGYPIEQ LATNCDFMET CHLLLYGNLP DAAGKEVFTK RVTNHTMVSE QMQFFLRGFR RDAHPMAIMT GLVGALSAFY HDSTDINNPE HREISAIRLI AKMPTLVAMA YKYSVGQPYM YPQNDLSYAG NFMRMMFATP CEEYKVNPII ERAMDRIFIL HADHEQNAST STVRLCGSSG TNPFAAIAAG VACLWGPAHG GANEACLNML GEIQQMGGIA KVGHFMEQVK DKNSGVKLMG FGHRVYKNYD PRAKLMQETC KEVLGALGLE NDPLFKLAMA LEKIALEDEY FVSRKLYPNV DFYSGIVQRA IGIPVNMFTG VFALARTVGW IAQLNEMISD PEYKIGRPRQ LFSGSVKRDV LPISKR
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