Gene Rfer_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1786 
Symbol 
ID3963306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1922112 
End bp1922984 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content60% 
IMG OID637916609 
Productacetyl-CoA carboxylase, carboxyl transferase, beta subunit 
Protein accessionYP_523046 
Protein GI89900575 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.313411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGC TCGAAAAACT ACTTCCCCCA AAAATTCAGC AAACCAACCC GGCCGACCGG 
CGCAGCGTGC CCTCGGGCCT GTGGATCAAG TGCCCGAGTT GCGACAGCGT GCTGTACAAA
ACCGACCTGG AGCAAAACCA GAACGTCTGC CCCAGCTGCA GCCACCACCA CCGGATTGGC
GCGCGCACCC GGCTCAATGT CTTTCTGGAC AATGAGGGTC GCTATGAAAT TGGGCAAGAG
GTGCTGCCGG TCGATGCCCT CAAGTTCAAG GACAGCCGCA AGTACCCGGA GCGACTGAAA
GAAGCGCTGG AAAACACCGG CGAGACCGAT GCGCTGGTGG TGATCGGCGG CGCCGTGCTG
GGCATCGGCG TGGTGGCGGC CTGCTTTGAA TTTGAATTCA TGGGCGGCAG CATGGGCTCC
GTGGTGGGCG AGCGTTTTGT GCGCGGCGTG CATACCGCGA TTGAGCAAAA AGTGCCGTTC
ATCTGTTTTT CGTCGACCGG CGGCGCGCGC ATGCAGGAAG GGCTGCTGAG CCTGATGCAA
ATGGCCAAAA CCAATGCCTC ACTGACGCGA CTGGCCAAAA AAGGCCTGCC CTTCATCAGC
GTGCTGACCG ACCCGACCAT GGGCGGTGTC AGCGCCGGCT TTGCCTTTCT GGGCGACGTG
GTGATTGCCG AGCCGAAGGC GCTCATCGGG TTTGCCGGCC CACGGGTGAT TGAATCCACC
ATGCGTGTGA CGCTGCCCGA AGGCTTTCAG CGCGCCGAAT TTCTGCAAAC CAAGGGGGCG
ATCGACCTTA TCTGTGATCG CCGCGAACTG CGTAAGACCA TCGCCAATAC CCTGGCCATG
TTGACGCGCC AATCCGCAGA TGCAGTGAGC TAA
 
Protein sequence
MSWLEKLLPP KIQQTNPADR RSVPSGLWIK CPSCDSVLYK TDLEQNQNVC PSCSHHHRIG 
ARTRLNVFLD NEGRYEIGQE VLPVDALKFK DSRKYPERLK EALENTGETD ALVVIGGAVL
GIGVVAACFE FEFMGGSMGS VVGERFVRGV HTAIEQKVPF ICFSSTGGAR MQEGLLSLMQ
MAKTNASLTR LAKKGLPFIS VLTDPTMGGV SAGFAFLGDV VIAEPKALIG FAGPRVIEST
MRVTLPEGFQ RAEFLQTKGA IDLICDRREL RKTIANTLAM LTRQSADAVS