Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1773 |
Symbol | |
ID | 3960864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1908661 |
End bp | 1910007 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637916596 |
Product | putative nitrilotriacetate monooxygenase component A protein |
Protein accession | YP_523033 |
Protein GI | 89900562 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.702307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA AACTCAGACT CGGCGCATTT TTACCCGGCG CCGGACAACA CGTGGCCGCC TGGCGGCACC CCGATGCCGC ATCGAGCAGC GTATTCGATT TTGAACACTA CAAACGCCTG GCCCAGACCG CCGAGCGCGG CCTGTTCGAC GCCTACTTCC TGGCTGACGG CCTGTCGGTG AATTTTGGCG GTGATGATGC GGGCCGGCGC GACCGCAGCA CCGGCTTTGA GCCGGTGACG CTGTTCTCTG CCCTCTCTAC CGTGACCAAG AACATCGGCT TCATCGCCAC CGCATCGACC ACCTACGAAG ACCCCTACCT GCTGGCGCGC AAGTTTGCCT CGCTGGATCA CCTGAGCGCG GGCCGCTCGG GCTGGAATGT GGTGACCTCG ACCGACGATG CCACCGCGCG CAATTTCGGC CGCGCGCAGC AAGCGGTTGC CACGGACCGC TACGACCGCG CCGAGGAGTT TGTCGATACC GTGACCGAAC TCTGGGACAG CTGGGAAGAC GATGCCTTCA TCCGCGACAA GGCCAGCGGC CAGTTTTTTG ACCCGGCCAA GCTGCACCCG CCGCACCACA AGGGCAAGCA TTTTTCCGTG GACGGCGCGC TCAACGTGTC GCGCCCGCCA CAGGGTTACC CGGTGATCGT GCAAGCCGGC CAGTCCGAGC CTGGGCTGGA ACTGGCCGCG CGCACGGCGG AAGTGGTCTT CACCGCCCAG CAAAGCCTGG AAGATGCGCA GGCTTTTTAC CGTGAACTGA AAAGCCGTTT GCCCAAGTTT GGCCGCAGCG CCGACCAGCT CAAGATCATG CCGGGGGTCT CGGTCTACGT GGCCGCCACC GAACGTGAAG CGCAAGCCAA GCTGCAGCAG CTCAATGACT TGATTCATCC GCAGGCCGGG CTGGCCTTGC TGGCGGGACT CTCCGGCGGC ACCGATTTGT CGCAGTACCC GCTGGACGGC CCGTTCCCGG AACTGCCCAA AACCGTGGGC TGGGTCAGCC GCCAACAGAT GATGGTGGAC ATTGCGCGCA AGCACAGCTT CAGCATCCGC CAGCTCTACC AATGGATTGC CACCGCGCGC GGACACTGGA CCATCGTGGG CACGCCCGTG CAAGTGGCCG ACCAGCTGCA GCTGTGGTTC GAAAACGAAG CGGCCGACGG CTTCAATGTC TTGCCGCCGG TGTTGCCCGG CAGCCTGGAT GACTTCGTGG ACCTGGTGAT TCCCGAGCTG CAGCGCCGAG GGCTGTTTCG CACGGCGTAC GAAGGCAAAA CGCTGCGTGA AAACCTGGGC TTGGCGCGAC CTGAGAACCA GCATCTCCTG GTTCGCCAGG ACGCCCGGGC GGCTTGA
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Protein sequence | MSKKLRLGAF LPGAGQHVAA WRHPDAASSS VFDFEHYKRL AQTAERGLFD AYFLADGLSV NFGGDDAGRR DRSTGFEPVT LFSALSTVTK NIGFIATAST TYEDPYLLAR KFASLDHLSA GRSGWNVVTS TDDATARNFG RAQQAVATDR YDRAEEFVDT VTELWDSWED DAFIRDKASG QFFDPAKLHP PHHKGKHFSV DGALNVSRPP QGYPVIVQAG QSEPGLELAA RTAEVVFTAQ QSLEDAQAFY RELKSRLPKF GRSADQLKIM PGVSVYVAAT EREAQAKLQQ LNDLIHPQAG LALLAGLSGG TDLSQYPLDG PFPELPKTVG WVSRQQMMVD IARKHSFSIR QLYQWIATAR GHWTIVGTPV QVADQLQLWF ENEAADGFNV LPPVLPGSLD DFVDLVIPEL QRRGLFRTAY EGKTLRENLG LARPENQHLL VRQDARAA
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