Gene Rfer_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1773 
Symbol 
ID3960864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1908661 
End bp1910007 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content64% 
IMG OID637916596 
Productputative nitrilotriacetate monooxygenase component A protein 
Protein accessionYP_523033 
Protein GI89900562 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.702307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA AACTCAGACT CGGCGCATTT TTACCCGGCG CCGGACAACA CGTGGCCGCC 
TGGCGGCACC CCGATGCCGC ATCGAGCAGC GTATTCGATT TTGAACACTA CAAACGCCTG
GCCCAGACCG CCGAGCGCGG CCTGTTCGAC GCCTACTTCC TGGCTGACGG CCTGTCGGTG
AATTTTGGCG GTGATGATGC GGGCCGGCGC GACCGCAGCA CCGGCTTTGA GCCGGTGACG
CTGTTCTCTG CCCTCTCTAC CGTGACCAAG AACATCGGCT TCATCGCCAC CGCATCGACC
ACCTACGAAG ACCCCTACCT GCTGGCGCGC AAGTTTGCCT CGCTGGATCA CCTGAGCGCG
GGCCGCTCGG GCTGGAATGT GGTGACCTCG ACCGACGATG CCACCGCGCG CAATTTCGGC
CGCGCGCAGC AAGCGGTTGC CACGGACCGC TACGACCGCG CCGAGGAGTT TGTCGATACC
GTGACCGAAC TCTGGGACAG CTGGGAAGAC GATGCCTTCA TCCGCGACAA GGCCAGCGGC
CAGTTTTTTG ACCCGGCCAA GCTGCACCCG CCGCACCACA AGGGCAAGCA TTTTTCCGTG
GACGGCGCGC TCAACGTGTC GCGCCCGCCA CAGGGTTACC CGGTGATCGT GCAAGCCGGC
CAGTCCGAGC CTGGGCTGGA ACTGGCCGCG CGCACGGCGG AAGTGGTCTT CACCGCCCAG
CAAAGCCTGG AAGATGCGCA GGCTTTTTAC CGTGAACTGA AAAGCCGTTT GCCCAAGTTT
GGCCGCAGCG CCGACCAGCT CAAGATCATG CCGGGGGTCT CGGTCTACGT GGCCGCCACC
GAACGTGAAG CGCAAGCCAA GCTGCAGCAG CTCAATGACT TGATTCATCC GCAGGCCGGG
CTGGCCTTGC TGGCGGGACT CTCCGGCGGC ACCGATTTGT CGCAGTACCC GCTGGACGGC
CCGTTCCCGG AACTGCCCAA AACCGTGGGC TGGGTCAGCC GCCAACAGAT GATGGTGGAC
ATTGCGCGCA AGCACAGCTT CAGCATCCGC CAGCTCTACC AATGGATTGC CACCGCGCGC
GGACACTGGA CCATCGTGGG CACGCCCGTG CAAGTGGCCG ACCAGCTGCA GCTGTGGTTC
GAAAACGAAG CGGCCGACGG CTTCAATGTC TTGCCGCCGG TGTTGCCCGG CAGCCTGGAT
GACTTCGTGG ACCTGGTGAT TCCCGAGCTG CAGCGCCGAG GGCTGTTTCG CACGGCGTAC
GAAGGCAAAA CGCTGCGTGA AAACCTGGGC TTGGCGCGAC CTGAGAACCA GCATCTCCTG
GTTCGCCAGG ACGCCCGGGC GGCTTGA
 
Protein sequence
MSKKLRLGAF LPGAGQHVAA WRHPDAASSS VFDFEHYKRL AQTAERGLFD AYFLADGLSV 
NFGGDDAGRR DRSTGFEPVT LFSALSTVTK NIGFIATAST TYEDPYLLAR KFASLDHLSA
GRSGWNVVTS TDDATARNFG RAQQAVATDR YDRAEEFVDT VTELWDSWED DAFIRDKASG
QFFDPAKLHP PHHKGKHFSV DGALNVSRPP QGYPVIVQAG QSEPGLELAA RTAEVVFTAQ
QSLEDAQAFY RELKSRLPKF GRSADQLKIM PGVSVYVAAT EREAQAKLQQ LNDLIHPQAG
LALLAGLSGG TDLSQYPLDG PFPELPKTVG WVSRQQMMVD IARKHSFSIR QLYQWIATAR
GHWTIVGTPV QVADQLQLWF ENEAADGFNV LPPVLPGSLD DFVDLVIPEL QRRGLFRTAY
EGKTLRENLG LARPENQHLL VRQDARAA